Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	VPS16	YPL045W	2397 nt		2.81	□□□□□ -1.96
CAF16	P43569	RSN1	YMR266W	2862 nt		2.81	□□□□□ -1.96
CAF16	P43569	PRP8	YHR165C	7242 nt		2.81	□□□□□ -1.96
CAF16	P43569	DOT6	YER088C	2013 nt		2.8	□□□□□ -1.96
CAF16	P43569	YDR169C-A	YDR169C-A	150 nt		2.8	□□□□□ -1.96
CAF16	P43569	YDR366C	YDR366C	399 nt		2.8	□□□□□ -1.96
CAF16	P43569	ACB1	YGR037C	264 nt		2.8	□□□□□ -1.96
CAF16	P43569	YOR072W-A	YOR072W-A	249 nt		2.8	□□□□□ -1.96
CAF16	P43569	YBR085C-A	YBR085C-A	258 nt		2.8	□□□□□ -1.96
CAF16	P43569	SOK2	YMR016C	2358 nt		2.8	□□□□□ -1.96
CAF16	P43569	BFA1	YJR053W	1725 nt		2.79	□□□□□ -1.96
CAF16	P43569	CHS2	YBR038W	2892 nt		2.79	□□□□□ -1.96
CAF16	P43569	SNC2	YOR327C	348 nt		2.79	□□□□□ -1.96
CAF16	P43569	LRG1	YDL240W	3054 nt		2.79	□□□□□ -1.96
CAF16	P43569	NOT5	YPR072W	1683 nt		2.79	□□□□□ -1.96
CAF16	P43569	RGA2	YDR379W	3030 nt		2.78	□□□□□ -1.96
CAF16	P43569	SMD1	YGR074W	441 nt		2.78	□□□□□ -1.96
CAF16	P43569	RPS27A	YKL156W	249 nt		2.78	□□□□□ -1.96
CAF16	P43569	RPL32	YBL092W	393 nt		2.78	□□□□□ -1.96
CAF16	P43569	YPR010C-A	YPR010C-A	219 nt		2.78	□□□□□ -1.96
CAF16	P43569	YDR186C	YDR186C	2634 nt		2.78	□□□□□ -1.96
CAF16	P43569	VPS35	YJL154C	2835 nt		2.78	□□□□□ -1.97
CAF16	P43569	TAE2	YPL009C	3117 nt		2.77	□□□□□ -1.97
CAF16	P43569	ATG13	YPR185W	2217 nt		2.77	□□□□□ -1.97
CAF16	P43569	DIS3	YOL021C	3006 nt		2.77	□□□□□ -1.97
CAF16	P43569	YHR007C-A	YHR007C-A	216 nt		2.77	□□□□□ -1.97
CAF16	P43569	YMR158W-B	YMR158W-B	321 nt		2.77	□□□□□ -1.97
CAF16	P43569	YPR099C	YPR099C	357 nt		2.77	□□□□□ -1.97
CAF16	P43569	YBR277C	YBR277C	402 nt		2.77	□□□□□ -1.97
CAF16	P43569	YGR067C	YGR067C	2415 nt		2.77	□□□□□ -1.97
CAF16	P43569	SGO1	YOR073W	1773 nt		2.77	□□□□□ -1.97
CAF16	P43569	BUD4	YJR092W	4344 nt		2.77	□□□□□ -1.97
CAF16	P43569	MOT1	YPL082C	5604 nt		2.76	□□□□□ -1.97
CAF16	P43569	RAX2	YLR084C	3663 nt		2.76	□□□□□ -1.97
CAF16	P43569	NOP10	YHR072W-A	177 nt		2.76	□□□□□ -1.97
CAF16	P43569	TMA10	YLR327C	261 nt		2.76	□□□□□ -1.97
CAF16	P43569	YMR290W-A	YMR290W-A	348 nt		2.76	□□□□□ -1.97
CAF16	P43569	REC8	YPR007C	2043 nt		2.76	□□□□□ -1.97
CAF16	P43569	HOS4	YIL112W	3252 nt		2.76	□□□□□ -1.97
CAF16	P43569	YIL082W-A	YIL082W-A	4497 nt		2.76	□□□□□ -1.97
CAF16	P43569	INP52	YNL106C	3552 nt		2.75	□□□□□ -1.97
CAF16	P43569	TFC4	YGR047C	3078 nt		2.75	□□□□□ -1.97
CAF16	P43569	YFL063W	YFL063W	456 nt		2.75	□□□□□ -1.97
CAF16	P43569	FLO11	YIR019C	4104 nt		2.75	□□□□□ -1.97
CAF16	P43569	CAF120	YNL278W	3183 nt		2.75	□□□□□ -1.97
CAF16	P43569	INP53	YOR109W	3324 nt		2.75	□□□□□ -1.97
CAF16	P43569	RPA190	YOR341W	4995 nt		2.74	□□□□□ -1.97
CAF16	P43569	RTT10	YPL183C	3042 nt		2.74	□□□□□ -1.97
CAF16	P43569	PAC1	YOR269W	1485 nt		2.74	□□□□□ -1.97
CAF16	P43569	YGR050C	YGR050C	357 nt		2.74	□□□□□ -1.97
CAF16	P43569	PHS1	YJL097W	654 nt		2.74	□□□□□ -1.97
CAF16	P43569	SPO14	YKR031C	5052 nt		2.74	□□□□□ -1.97
CAF16	P43569	AMS1	YGL156W	3252 nt		2.74	□□□□□ -1.97
CAF16	P43569	INP51	YIL002C	2841 nt		2.74	□□□□□ -1.97
CAF16	P43569	KAP123	YER110C	3342 nt		2.73	□□□□□ -1.97
CAF16	P43569	OSW7	YFR039C	1533 nt		2.73	□□□□□ -1.97
CAF16	P43569	NUP120	YKL057C	3114 nt		2.73	□□□□□ -1.97
CAF16	P43569	SEC7	YDR170C	6030 nt		2.73	□□□□□ -1.97
CAF16	P43569	RPL35A	YDL191W	363 nt		2.73	□□□□□ -1.97
CAF16	P43569	GCN4	YEL009C	846 nt		2.73	□□□□□ -1.97
CAF16	P43569	TAR1	YLR154W-C	375 nt		2.73	□□□□□ -1.97
CAF16	P43569	GOT1	YMR292W	417 nt		2.73	□□□□□ -1.97
CAF16	P43569	SUL1	YBR294W	2580 nt		2.73	□□□□□ -1.97
CAF16	P43569	UTP14	YML093W	2700 nt		2.73	□□□□□ -1.97
CAF16	P43569	RBK1	YCR036W	1002 nt		2.72	□□□□□ -1.97
CAF16	P43569	HMRA2	YCR096C	360 nt		2.72	□□□□□ -1.97
CAF16	P43569	snR8	snR8	190 nt		2.72	□□□□□ -1.97
CAF16	P43569	CSN9	YDR179C	489 nt		2.72	□□□□□ -1.97
CAF16	P43569	YML037C	YML037C	1023 nt		2.72	□□□□□ -1.97
CAF16	P43569	YMR320W	YMR320W	306 nt		2.72	□□□□□ -1.97
CAF16	P43569	YPR203W	YPR203W	309 nt		2.72	□□□□□ -1.97
CAF16	P43569	PMR1	YGL167C	2853 nt		2.72	□□□□□ -1.97
CAF16	P43569	JSN1	YJR091C	3276 nt		2.72	□□□□□ -1.97
CAF16	P43569	PAN3	YKL025C	2040 nt		2.71	□□□□□ -1.98
CAF16	P43569	HSC82	YMR186W	2118 nt		2.71	□□□□□ -1.98
CAF16	P43569	RRP6	YOR001W	2202 nt		2.71	□□□□□ -1.98
CAF16	P43569	snR42	snR42	351 nt		2.71	□□□□□ -1.98
CAF16	P43569	GIS1	YDR096W	2685 nt		2.71	□□□□□ -1.98
CAF16	P43569	AFI1	YOR129C	2682 nt		2.71	□□□□□ -1.98
CAF16	P43569	TOF2	YKR010C	2316 nt		2.7	□□□□□ -1.98
CAF16	P43569	TOM1	YDR457W	9807 nt		2.7	□□□□□ -1.98
CAF16	P43569	YEL057C	YEL057C	702 nt		2.69	□□□□□ -1.98
CAF16	P43569	YGL069C	YGL069C	465 nt		2.69	□□□□□ -1.98
CAF16	P43569	MRPL33	YMR286W	261 nt		2.69	□□□□□ -1.98
CAF16	P43569	RIC1	YLR039C	3171 nt		2.69	□□□□□ -1.98
CAF16	P43569	DYN1	YKR054C	12279 nt		2.69	□□□□□ -1.98
CAF16	P43569	DFG16	YOR030W	1860 nt		2.69	□□□□□ -1.98
CAF16	P43569	GEA1	YJR031C	4227 nt		2.69	□□□□□ -1.98
CAF16	P43569	SAP1	YER047C	2694 nt		2.68	□□□□□ -1.98
CAF16	P43569	YEL043W	YEL043W	2871 nt		2.68	□□□□□ -1.98
CAF16	P43569	NFT1	YKR103W	3657 nt		2.68	□□□□□ -1.98
CAF16	P43569	PNC1	YGL037C	651 nt		2.68	□□□□□ -1.98
CAF16	P43569	YGL149W	YGL149W	306 nt		2.68	□□□□□ -1.98
CAF16	P43569	YHR086W-A	YHR086W-A	162 nt		2.68	□□□□□ -1.98
CAF16	P43569	YIL059C	YIL059C	366 nt		2.68	□□□□□ -1.98
CAF16	P43569	SNC1	YAL030W	354 nt		2.68	□□□□□ -1.98
CAF16	P43569	VMA9	YCL005W-A	222 nt		2.68	□□□□□ -1.98
CAF16	P43569	YLR278C	YLR278C	4026 nt		2.68	□□□□□ -1.98
CAF16	P43569	SNF5	YBR289W	2718 nt		2.68	□□□□□ -1.98
CAF16	P43569	YHR063W-A	YHR063W-A	336 nt		2.67	□□□□□ -1.98

Retrieved 100 of 7,029 protein–RNA pairs in 71.2 ms