Protein–RNA interactions for Protein: P33417

IXR1, Intrastrand cross-link recognition protein, yeastyeast

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IXR1P33417 HOT1YMR172W 2160 nt3.97□□□□□ -1.77
IXR1P33417 SLA1YBL007C 3735 nt3.97□□□□□ -1.77
IXR1P33417 VTC4YJL012C 2166 nt3.96□□□□□ -1.78
IXR1P33417 YCG1YDR325W 3108 nt3.96□□□□□ -1.78
IXR1P33417 NUP120YKL057C 3114 nt3.96□□□□□ -1.78
IXR1P33417 QCR7YDR529C 384 nt3.96□□□□□ -1.78
IXR1P33417 YPR014CYPR014C 330 nt3.96□□□□□ -1.78
IXR1P33417 CHS3YBR023C 3498 nt3.96□□□□□ -1.78
IXR1P33417 MTC4YBR255W 2085 nt3.96□□□□□ -1.78
IXR1P33417 FAT1YBR041W 2010 nt3.95□□□□□ -1.78
IXR1P33417 ATG2YNL242W 4779 nt3.95□□□□□ -1.78
IXR1P33417 AKR1YDR264C 2295 nt3.95□□□□□ -1.78
IXR1P33417 IPT1YDR072C 1584 nt3.95□□□□□ -1.78
IXR1P33417 RPS17BYDR447C 411 nt3.95□□□□□ -1.78
IXR1P33417 YEL073CYEL073C 324 nt3.95□□□□□ -1.78
IXR1P33417 YCL001W-BYCL001W-B 255 nt3.95□□□□□ -1.78
IXR1P33417 APL4YPR029C 2499 nt3.95□□□□□ -1.78
IXR1P33417 ZDS1YMR273C 2748 nt3.94□□□□□ -1.78
IXR1P33417 SPB1YCL054W 2526 nt3.94□□□□□ -1.78
IXR1P33417 HMG1YML075C 3165 nt3.94□□□□□ -1.78
IXR1P33417 MUK1YPL070W 1839 nt3.94□□□□□ -1.78
IXR1P33417 ULI1YFR026C 510 nt3.94□□□□□ -1.78
IXR1P33417 YAL064W-BYAL064W-B 381 nt3.94□□□□□ -1.78
IXR1P33417 RPL20BYOR312C 519 nt3.94□□□□□ -1.78
IXR1P33417 tF(GAA)DtF(GAA)D 73 nt3.93□□□□□ -1.78
IXR1P33417 tF(GAA)NtF(GAA)N 73 nt3.93□□□□□ -1.78
IXR1P33417 SBH1YER087C-B 249 nt3.93□□□□□ -1.78
IXR1P33417 SKT5YBL061C 2091 nt3.93□□□□□ -1.78
IXR1P33417 CCM1YGR150C 2595 nt3.92□□□□□ -1.78
IXR1P33417 APC11YDL008W 498 nt3.92□□□□□ -1.78
IXR1P33417 COX23YHR116W 456 nt3.92□□□□□ -1.78
IXR1P33417 TMA19YKL056C 504 nt3.92□□□□□ -1.78
IXR1P33417 RPS17AYML024W 411 nt3.92□□□□□ -1.78
IXR1P33417 YMR324CYMR324C 243 nt3.92□□□□□ -1.78
IXR1P33417 RNR1YER070W 2667 nt3.92□□□□□ -1.78
IXR1P33417 ASG1YIL130W 2895 nt3.92□□□□□ -1.78
IXR1P33417 NSP1YJL041W 2472 nt3.92□□□□□ -1.78
IXR1P33417 MSR1YHR091C 1932 nt3.91□□□□□ -1.78
IXR1P33417 BNI4YNL233W 2679 nt3.91□□□□□ -1.78
IXR1P33417 SIN3YOL004W 4611 nt3.91□□□□□ -1.78
IXR1P33417 SNF2YOR290C 5112 nt3.91□□□□□ -1.78
IXR1P33417 YGR051CYGR051C 324 nt3.91□□□□□ -1.78
IXR1P33417 YKL165C-AYKL165C-A 234 nt3.91□□□□□ -1.78
IXR1P33417 YPR003CYPR003C 2265 nt3.91□□□□□ -1.78
IXR1P33417 MBB1YJL199C 327 nt3.9□□□□□ -1.79
IXR1P33417 YMR122W-AYMR122W-A 255 nt3.9□□□□□ -1.79
IXR1P33417 YOL057WYOL057W 2136 nt3.9□□□□□ -1.79
IXR1P33417 YOR314W-AYOR314W-A 111 nt3.9□□□□□ -1.79
IXR1P33417 CHD1YER164W 4407 nt3.9□□□□□ -1.79
IXR1P33417 YCF1YDR135C 4548 nt3.9□□□□□ -1.79
IXR1P33417 PHO81YGR233C 3537 nt3.89□□□□□ -1.79
IXR1P33417 PMP1YCR024C-A 123 nt3.89□□□□□ -1.79
IXR1P33417 DFG16YOR030W 1860 nt3.89□□□□□ -1.79
IXR1P33417 MIS1YBR084W 2928 nt3.89□□□□□ -1.79
IXR1P33417 TOP1YOL006C 2310 nt3.89□□□□□ -1.79
IXR1P33417 MSH2YOL090W 2895 nt3.88□□□□□ -1.79
IXR1P33417 SSB1YDL229W 1842 nt3.88□□□□□ -1.79
IXR1P33417 GSC2YGR032W 5688 nt3.88□□□□□ -1.79
IXR1P33417 YGL069CYGL069C 465 nt3.88□□□□□ -1.79
IXR1P33417 YNL103W-AYNL103W-A 90 nt3.88□□□□□ -1.79
IXR1P33417 GIS2YNL255C 462 nt3.88□□□□□ -1.79
IXR1P33417 TMA108YIL137C 2841 nt3.88□□□□□ -1.79
IXR1P33417 COG3YER157W 2406 nt3.87□□□□□ -1.79
IXR1P33417 IOC2YLR095C 2439 nt3.87□□□□□ -1.79
IXR1P33417 RAD2YGR258C 3096 nt3.87□□□□□ -1.79
IXR1P33417 PEX1YKL197C 3132 nt3.87□□□□□ -1.79
IXR1P33417 CDC20YGL116W 1833 nt3.87□□□□□ -1.79
IXR1P33417 SEC15YGL233W 2733 nt3.86□□□□□ -1.79
IXR1P33417 YPK9YOR291W 4419 nt3.86□□□□□ -1.79
IXR1P33417 FLO10YKR102W 3510 nt3.86□□□□□ -1.79
IXR1P33417 RPB2YOR151C 3675 nt3.86□□□□□ -1.79
IXR1P33417 YEL032C-AYEL032C-A 162 nt3.86□□□□□ -1.79
IXR1P33417 PRE4YFR050C 801 nt3.86□□□□□ -1.79
IXR1P33417 FPR1YNL135C 345 nt3.86□□□□□ -1.79
IXR1P33417 TMN3YER113C 2121 nt3.86□□□□□ -1.79
IXR1P33417 HSC82YMR186W 2118 nt3.85□□□□□ -1.79
IXR1P33417 SPT21YMR179W 2277 nt3.85□□□□□ -1.79
IXR1P33417 YGL024WYGL024W 336 nt3.85□□□□□ -1.79
IXR1P33417 SWH1YAR042W 3567 nt3.85□□□□□ -1.79
IXR1P33417 TIF4632YGL049C 2745 nt3.85□□□□□ -1.79
IXR1P33417 YPL260WYPL260W 1656 nt3.84□□□□□ -1.79
IXR1P33417 REG1YDR028C 3045 nt3.84□□□□□ -1.79
IXR1P33417 GAL11YOL051W 3246 nt3.84□□□□□ -1.79
IXR1P33417 PMP2YEL017C-A 132 nt3.84□□□□□ -1.79
IXR1P33417 tK(UUU)DtK(UUU)D 73 nt3.84□□□□□ -1.79
IXR1P33417 tK(UUU)G1tK(UUU)G1 73 nt3.84□□□□□ -1.79
IXR1P33417 tK(UUU)G2tK(UUU)G2 73 nt3.84□□□□□ -1.79
IXR1P33417 tK(UUU)KtK(UUU)K 73 nt3.84□□□□□ -1.79
IXR1P33417 tK(UUU)LtK(UUU)L 73 nt3.84□□□□□ -1.79
IXR1P33417 tK(UUU)OtK(UUU)O 73 nt3.84□□□□□ -1.79
IXR1P33417 tK(UUU)PtK(UUU)P 73 nt3.84□□□□□ -1.79
IXR1P33417 ECM12YHR021W-A 456 nt3.84□□□□□ -1.79
IXR1P33417 EMC1YCL045C 2283 nt3.84□□□□□ -1.79
IXR1P33417 YLR352WYLR352W 2424 nt3.84□□□□□ -1.8
IXR1P33417 ARO1YDR127W 4767 nt3.83□□□□□ -1.8
IXR1P33417 YEL043WYEL043W 2871 nt3.83□□□□□ -1.8
IXR1P33417 LSO2YGR169C-A 279 nt3.83□□□□□ -1.8
IXR1P33417 RPL33BYOR234C 324 nt3.83□□□□□ -1.8
IXR1P33417 SPO21YOL091W 1830 nt3.83□□□□□ -1.8
IXR1P33417 GIN4YDR507C 3429 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 60.7 ms