Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 AC016769.1-201ENST00000409132 1010 ntBASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 SLC7A5P1-201ENST00000568957 537 ntBASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV1A0A0A0MS02 FEM1AP1-201ENST00000431297 1995 ntBASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 LINC01006-201ENST00000333319 2292 ntBASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 MIR5787-201ENST00000611784 55 ntBASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV1A0A0A0MS02 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 RBM17P2-201ENST00000616397 1405 ntBASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 KRT18P11-201ENST00000435214 1283 ntBASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 KRT18P5-201ENST00000436075 1291 ntBASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 AC243732.1-201ENST00000612648 864 ntBASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV1A0A0A0MS02 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 AC026271.2-201ENST00000428091 497 ntBASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 CDV3P1-201ENST00000471403 739 ntBASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 LINC01521-201ENST00000504184 1943 ntBASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.74□□□□□ -0.05
TRGV1A0A0A0MS02 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRGV1A0A0A0MS02 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRGV1A0A0A0MS02 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms