Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 AC092720.2-201ENST00000602388 1665 ntBASIC21.21■□□□□ 0.99
RFX6Q8HWS3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 AC007322.3-201ENST00000426526 701 ntBASIC21.21■□□□□ 0.99
RFX6Q8HWS3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 MIR2861-201ENST00000636310 90 ntBASIC21.21■□□□□ 0.99
RFX6Q8HWS3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFX6Q8HWS3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RFX6Q8HWS3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
RFX6Q8HWS3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 AL391422.3-201ENST00000603791 2761 ntBASIC21.19■□□□□ 0.98
RFX6Q8HWS3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 AL512408.1-201ENST00000569378 2000 ntBASIC21.19■□□□□ 0.98
RFX6Q8HWS3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RFX6Q8HWS3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFX6Q8HWS3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
RFX6Q8HWS3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms