Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 MTR4YJL050W 3222 nt3.35□□□□□ -1.87
TY1A-PR3Q6Q5H1 REC104YHR157W 549 nt3.34□□□□□ -1.87
TY1A-PR3Q6Q5H1 YMR172C-AYMR172C-A 384 nt3.34□□□□□ -1.87
TY1A-PR3Q6Q5H1 YNL010WYNL010W 726 nt3.34□□□□□ -1.87
TY1A-PR3Q6Q5H1 YLL032CYLL032C 2478 nt3.34□□□□□ -1.88
TY1A-PR3Q6Q5H1 DIS3YOL021C 3006 nt3.34□□□□□ -1.88
TY1A-PR3Q6Q5H1 BOI1YBL085W 2943 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 PUF6YDR496C 1971 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 RPN2YIL075C 2838 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 YEL014CYEL014C 306 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 PAU2YEL049W 363 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 YGL074CYGL074C 327 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 YIL059CYIL059C 366 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 YJL222W-BYJL222W-B 138 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 SHH3YMR118C 591 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 HHT1YBR010W 411 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 PEX1YKL197C 3132 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 SHQ1YIL104C 1524 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 SCW11YGL028C 1629 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 CDC20YGL116W 1833 nt3.33□□□□□ -1.88
TY1A-PR3Q6Q5H1 YDR193WYDR193W 399 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 YDR464C-AYDR464C-A 189 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 YMR324CYMR324C 243 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 YNL057WYNL057W 333 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 YPR063CYPR063C 423 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 YBR121C-AYBR121C-A 159 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 VIK1YPL253C 1944 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 DUF1YOL087C 3351 nt3.32□□□□□ -1.88
TY1A-PR3Q6Q5H1 APC2YLR127C 2562 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 SOK2YMR016C 2358 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 snR60snR60 104 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 SPT4YGR063C 309 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 YHL041WYHL041W 450 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 PHS1YJL097W 654 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 MRPL33YMR286W 261 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 YOR302WYOR302W 78 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 RPO21YDL140C 5202 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 KAR3YPR141C 2190 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 MDV1YJL112W 2145 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 SPT10YJL127C 1923 nt3.31□□□□□ -1.88
TY1A-PR3Q6Q5H1 GIN4YDR507C 3429 nt3.3□□□□□ -1.88
TY1A-PR3Q6Q5H1 YGR250CYGR250C 2346 nt3.3□□□□□ -1.88
TY1A-PR3Q6Q5H1 NPC2YDL046W 522 nt3.3□□□□□ -1.88
TY1A-PR3Q6Q5H1 VPS55YJR044C 423 nt3.3□□□□□ -1.88
TY1A-PR3Q6Q5H1 YMR141W-AYMR141W-A 225 nt3.3□□□□□ -1.88
TY1A-PR3Q6Q5H1 YNL205CYNL205C 423 nt3.3□□□□□ -1.88
TY1A-PR3Q6Q5H1 BAS1YKR099W 2436 nt3.3□□□□□ -1.88
TY1A-PR3Q6Q5H1 QCR7YDR529C 384 nt3.29□□□□□ -1.88
TY1A-PR3Q6Q5H1 YER088C-AYER088C-A 324 nt3.29□□□□□ -1.88
TY1A-PR3Q6Q5H1 YGL024WYGL024W 336 nt3.29□□□□□ -1.88
TY1A-PR3Q6Q5H1 YMR194C-AYMR194C-A 225 nt3.29□□□□□ -1.88
TY1A-PR3Q6Q5H1 MYO3YKL129C 3819 nt3.29□□□□□ -1.88
TY1A-PR3Q6Q5H1 PSO2YMR137C 1986 nt3.29□□□□□ -1.88
TY1A-PR3Q6Q5H1 SNT1YCR033W 3681 nt3.29□□□□□ -1.88
TY1A-PR3Q6Q5H1 DFG16YOR030W 1860 nt3.28□□□□□ -1.88
TY1A-PR3Q6Q5H1 DIA2YOR080W 2199 nt3.28□□□□□ -1.88
TY1A-PR3Q6Q5H1 RAD5YLR032W 3510 nt3.28□□□□□ -1.88
TY1A-PR3Q6Q5H1 LSO2YGR169C-A 279 nt3.28□□□□□ -1.88
TY1A-PR3Q6Q5H1 ZDS2YML109W 2829 nt3.28□□□□□ -1.88
TY1A-PR3Q6Q5H1 HEF3YNL014W 3135 nt3.28□□□□□ -1.88
TY1A-PR3Q6Q5H1 SSM4YIL030C 3960 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 MSK1YNL073W 1731 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 STU1YBL034C 4542 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 VPS53YJL029C 2469 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 GEP4YHR100C 558 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 DLS1YJL065C 504 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 YJL150WYJL150W 303 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 YLR154W-EYLR154W-E 204 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 YNL028WYNL028W 318 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 STE23YLR389C 3084 nt3.27□□□□□ -1.89
TY1A-PR3Q6Q5H1 PRP39YML046W 1890 nt3.26□□□□□ -1.89
TY1A-PR3Q6Q5H1 AI2Q0055 2565 nt3.26□□□□□ -1.89
TY1A-PR3Q6Q5H1 DOT6YER088C 2013 nt3.26□□□□□ -1.89
TY1A-PR3Q6Q5H1 TIM11YDR322C-A 291 nt3.26□□□□□ -1.89
TY1A-PR3Q6Q5H1 PCC1YKR095W-A 267 nt3.26□□□□□ -1.89
TY1A-PR3Q6Q5H1 TRM2YKR056W 1920 nt3.26□□□□□ -1.89
TY1A-PR3Q6Q5H1 NOG1YPL093W 1944 nt3.26□□□□□ -1.89
TY1A-PR3Q6Q5H1 ITC1YGL133W 3795 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 RIX1YHR197W 2292 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 SDH6YDR379C-A 240 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 RPL38YLR325C 237 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 TAF1YGR274C 3201 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 BMS1YPL217C 3552 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 FAT1YBR041W 2010 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 SNU114YKL173W 3027 nt3.25□□□□□ -1.89
TY1A-PR3Q6Q5H1 tF(GAA)QtF(GAA)Q 75 nt3.24□□□□□ -1.89
TY1A-PR3Q6Q5H1 YFL065CYFL065C 309 nt3.24□□□□□ -1.89
TY1A-PR3Q6Q5H1 RPL25YOL127W 429 nt3.24□□□□□ -1.89
TY1A-PR3Q6Q5H1 ASG1YIL130W 2895 nt3.24□□□□□ -1.89
TY1A-PR3Q6Q5H1 TUB2YFL037W 1374 nt3.24□□□□□ -1.89
TY1A-PR3Q6Q5H1 HDA3YPR179C 1968 nt3.23□□□□□ -1.89
TY1A-PR3Q6Q5H1 OLI1Q0130 231 nt3.23□□□□□ -1.89
TY1A-PR3Q6Q5H1 YOL057WYOL057W 2136 nt3.23□□□□□ -1.89
TY1A-PR3Q6Q5H1 YTA7YGR270W 4140 nt3.23□□□□□ -1.89
TY1A-PR3Q6Q5H1 NCL1YBL024W 2055 nt3.23□□□□□ -1.89
TY1A-PR3Q6Q5H1 YGL014C-AYGL014C-A 162 nt3.22□□□□□ -1.89
TY1A-PR3Q6Q5H1 FMP46YKR049C 402 nt3.22□□□□□ -1.89
TY1A-PR3Q6Q5H1 YML007C-AYML007C-A 111 nt3.22□□□□□ -1.89
TY1A-PR3Q6Q5H1 CSE2YNR010W 450 nt3.22□□□□□ -1.89
TY1A-PR3Q6Q5H1 SET1YHR119W 3243 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms