Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 TAD1YGL243W 1203 nt1.6□□□□□ -2.15
RRP40Q08285 YDR341CYDR341C 1824 nt1.6□□□□□ -2.15
RRP40Q08285 SPO22YIL073C 2928 nt1.59□□□□□ -2.15
RRP40Q08285 YDR018CYDR018C 1191 nt1.59□□□□□ -2.15
RRP40Q08285 HOP2YGL033W 657 nt1.59□□□□□ -2.15
RRP40Q08285 YGR109W-AYGR109W-A 873 nt1.59□□□□□ -2.15
RRP40Q08285 YGR115CYGR115C 780 nt1.59□□□□□ -2.15
RRP40Q08285 YIL082WYIL082W 873 nt1.59□□□□□ -2.15
RRP40Q08285 IST3YIR005W 447 nt1.59□□□□□ -2.15
RRP40Q08285 CSE4YKL049C 690 nt1.59□□□□□ -2.15
RRP40Q08285 YLR302CYLR302C 363 nt1.59□□□□□ -2.15
RRP40Q08285 TAP42YMR028W 1101 nt1.59□□□□□ -2.15
RRP40Q08285 RPB5YBR154C 648 nt1.59□□□□□ -2.15
RRP40Q08285 MGR1YCL044C 1254 nt1.59□□□□□ -2.15
RRP40Q08285 SBE22YHR103W 2559 nt1.59□□□□□ -2.15
RRP40Q08285 SYH1YPL105C 2550 nt1.58□□□□□ -2.16
RRP40Q08285 ARP7YPR034W 1434 nt1.58□□□□□ -2.16
RRP40Q08285 YGL109WYGL109W 324 nt1.58□□□□□ -2.16
RRP40Q08285 ACF4YJR083C 930 nt1.58□□□□□ -2.16
RRP40Q08285 SYM1YLR251W 594 nt1.58□□□□□ -2.16
RRP40Q08285 YLR285C-AYLR285C-A 171 nt1.58□□□□□ -2.16
RRP40Q08285 PDP3YLR455W 915 nt1.58□□□□□ -2.16
RRP40Q08285 YNL235CYNL235C 432 nt1.58□□□□□ -2.16
RRP40Q08285 IPP1YBR011C 864 nt1.58□□□□□ -2.16
RRP40Q08285 SPC72YAL047C 1869 nt1.58□□□□□ -2.16
RRP40Q08285 HSL1YKL101W 4557 nt1.57□□□□□ -2.16
RRP40Q08285 HER1YOR227W 3741 nt1.57□□□□□ -2.16
RRP40Q08285 TDA2YER071C 381 nt1.57□□□□□ -2.16
RRP40Q08285 PRE4YFR050C 801 nt1.57□□□□□ -2.16
RRP40Q08285 SMD1YGR074W 441 nt1.57□□□□□ -2.16
RRP40Q08285 PEP8YJL053W 1140 nt1.57□□□□□ -2.16
RRP40Q08285 YJL127C-BYJL127C-B 159 nt1.57□□□□□ -2.16
RRP40Q08285 ATP18YML081C-A 180 nt1.57□□□□□ -2.16
RRP40Q08285 COA6YMR244C-A 315 nt1.57□□□□□ -2.16
RRP40Q08285 SAR1YPL218W 573 nt1.57□□□□□ -2.16
RRP40Q08285 YDL163WYDL163W 303 nt1.56□□□□□ -2.16
RRP40Q08285 IRC2YDR112W 309 nt1.56□□□□□ -2.16
RRP40Q08285 RPL29YFR032C-A 180 nt1.56□□□□□ -2.16
RRP40Q08285 HRI1YLR301W 735 nt1.56□□□□□ -2.16
RRP40Q08285 YLR366WYLR366W 306 nt1.56□□□□□ -2.16
RRP40Q08285 MRPL44YMR225C 297 nt1.56□□□□□ -2.16
RRP40Q08285 HCS1YKL017C 2052 nt1.55□□□□□ -2.16
RRP40Q08285 TRM3YDL112W 4311 nt1.55□□□□□ -2.16
RRP40Q08285 YCR087C-AYCR087C-A 462 nt1.55□□□□□ -2.16
RRP40Q08285 YDL009CYDL009C 324 nt1.55□□□□□ -2.16
RRP40Q08285 BMT5YIL096C 1011 nt1.55□□□□□ -2.16
RRP40Q08285 RPI1YIL119C 1224 nt1.55□□□□□ -2.16
RRP40Q08285 TEN1YLR010C 483 nt1.55□□□□□ -2.16
RRP40Q08285 YLR307C-AYLR307C-A 264 nt1.55□□□□□ -2.16
RRP40Q08285 TAZ1YPR140W 1146 nt1.55□□□□□ -2.16
RRP40Q08285 YBR287WYBR287W 1284 nt1.55□□□□□ -2.16
RRP40Q08285 KIP1YBL063W 3336 nt1.55□□□□□ -2.16
RRP40Q08285 PET309YLR067C 2898 nt1.55□□□□□ -2.16
RRP40Q08285 VPS15YBR097W 4365 nt1.54□□□□□ -2.16
RRP40Q08285 BRO1YPL084W 2535 nt1.54□□□□□ -2.16
RRP40Q08285 RBK1YCR036W 1002 nt1.54□□□□□ -2.16
RRP40Q08285 BTT1YDR252W 450 nt1.54□□□□□ -2.16
RRP40Q08285 YDR286CYDR286C 345 nt1.54□□□□□ -2.16
RRP40Q08285 LAG1YHL003C 1236 nt1.54□□□□□ -2.16
RRP40Q08285 GRX8YLR364W 330 nt1.54□□□□□ -2.16
RRP40Q08285 YMR052C-AYMR052C-A 366 nt1.54□□□□□ -2.16
RRP40Q08285 YPR170CYPR170C 336 nt1.54□□□□□ -2.16
RRP40Q08285 HSH155YMR288W 2916 nt1.53□□□□□ -2.16
RRP40Q08285 GRR1YJR090C 3456 nt1.53□□□□□ -2.16
RRP40Q08285 YDL062WYDL062W 426 nt1.53□□□□□ -2.16
RRP40Q08285 DFG10YIL049W 762 nt1.53□□□□□ -2.16
RRP40Q08285 TPM2YIL138C 486 nt1.53□□□□□ -2.16
RRP40Q08285 NAM7YMR080C 2916 nt1.53□□□□□ -2.17
RRP40Q08285 VPS35YJL154C 2835 nt1.53□□□□□ -2.17
RRP40Q08285 CRD1YDL142C 852 nt1.52□□□□□ -2.17
RRP40Q08285 FAR7YFR008W 666 nt1.52□□□□□ -2.17
RRP40Q08285 YJL047C-AYJL047C-A 135 nt1.52□□□□□ -2.17
RRP40Q08285 SDS22YKL193C 1017 nt1.52□□□□□ -2.17
RRP40Q08285 YOR146WYOR146W 306 nt1.52□□□□□ -2.17
RRP40Q08285 BPH1YCR032W 6504 nt1.52□□□□□ -2.17
RRP40Q08285 YOR343W-BYOR343W-B 5313 nt1.52□□□□□ -2.17
RRP40Q08285 CRM1YGR218W 3255 nt1.51□□□□□ -2.17
RRP40Q08285 BRR2YER172C 6492 nt1.51□□□□□ -2.17
RRP40Q08285 SPE1YKL184W 1401 nt1.51□□□□□ -2.17
RRP40Q08285 RPC25YKL144C 639 nt1.51□□□□□ -2.17
RRP40Q08285 YNL226WYNL226W 411 nt1.51□□□□□ -2.17
RRP40Q08285 YPL238CYPL238C 390 nt1.51□□□□□ -2.17
RRP40Q08285 YCL002CYCL002C 792 nt1.51□□□□□ -2.17
RRP40Q08285 VMR1YHL035C 4779 nt1.51□□□□□ -2.17
RRP40Q08285 RKM1YPL208W 1752 nt1.5□□□□□ -2.17
RRP40Q08285 PGD1YGL025C 1194 nt1.5□□□□□ -2.17
RRP40Q08285 YOR105WYOR105W 327 nt1.5□□□□□ -2.17
RRP40Q08285 YPL080CYPL080C 327 nt1.5□□□□□ -2.17
RRP40Q08285 ATP15YPL271W 189 nt1.5□□□□□ -2.17
RRP40Q08285 YJR039WYJR039W 3366 nt1.5□□□□□ -2.17
RRP40Q08285 SLM1YIL105C 2061 nt1.5□□□□□ -2.17
RRP40Q08285 SPC110YDR356W 2835 nt1.5□□□□□ -2.17
RRP40Q08285 TBS1YBR150C 3285 nt1.49□□□□□ -2.17
RRP40Q08285 SAC3YDR159W 3906 nt1.49□□□□□ -2.17
RRP40Q08285 snR83snR83 306 nt1.49□□□□□ -2.17
RRP40Q08285 YJL119CYJL119C 324 nt1.49□□□□□ -2.17
RRP40Q08285 YLR031WYLR031W 561 nt1.49□□□□□ -2.17
RRP40Q08285 YNL150WYNL150W 408 nt1.49□□□□□ -2.17
RRP40Q08285 MMS22YLR320W 4365 nt1.49□□□□□ -2.17
RRP40Q08285 YFL002W-BYFL002W-B 1317 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 106.8 ms