Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 YAT2YER024W 2772 nt3.28□□□□□ -1.88
NPL3Q01560 ADK1YDR226W 669 nt3.28□□□□□ -1.88
NPL3Q01560 PAU10YDR542W 363 nt3.28□□□□□ -1.88
NPL3Q01560 tK(UUU)DtK(UUU)D 73 nt3.28□□□□□ -1.88
NPL3Q01560 tK(UUU)G1tK(UUU)G1 73 nt3.28□□□□□ -1.88
NPL3Q01560 tK(UUU)G2tK(UUU)G2 73 nt3.28□□□□□ -1.88
NPL3Q01560 tK(UUU)KtK(UUU)K 73 nt3.28□□□□□ -1.88
NPL3Q01560 tK(UUU)LtK(UUU)L 73 nt3.28□□□□□ -1.88
NPL3Q01560 tK(UUU)OtK(UUU)O 73 nt3.28□□□□□ -1.88
NPL3Q01560 tK(UUU)PtK(UUU)P 73 nt3.28□□□□□ -1.88
NPL3Q01560 PAU11YGL261C 363 nt3.28□□□□□ -1.88
NPL3Q01560 NCE101YJL205C 162 nt3.28□□□□□ -1.88 RIP-Chip
NPL3Q01560 RPS22BYLR367W 393 nt3.28□□□□□ -1.88 RIP-Chip
NPL3Q01560 PAU4YLR461W 363 nt3.28□□□□□ -1.88
NPL3Q01560 YNL338WYNL338W 159 nt3.28□□□□□ -1.88
NPL3Q01560 TFC1YBR123C 1950 nt3.28□□□□□ -1.88
NPL3Q01560 RPA135YPR010C 3612 nt3.28□□□□□ -1.88
NPL3Q01560 NUP82YJL061W 2142 nt3.28□□□□□ -1.89
NPL3Q01560 YAK1YJL141C 2424 nt3.28□□□□□ -1.89
NPL3Q01560 YSP2YDR326C 4317 nt3.28□□□□□ -1.89
NPL3Q01560 SOK1YDR006C 2706 nt3.27□□□□□ -1.89
NPL3Q01560 TIM11YDR322C-A 291 nt3.27□□□□□ -1.89 RIP-Chip
NPL3Q01560 RPL30YGL030W 318 nt3.27□□□□□ -1.89 RIP-Chip
NPL3Q01560 ATP15YPL271W 189 nt3.27□□□□□ -1.89 RIP-Chip
NPL3Q01560 RRP5YMR229C 5190 nt3.26□□□□□ -1.89
NPL3Q01560 YER039C-AYER039C-A 219 nt3.26□□□□□ -1.89
NPL3Q01560 YGL041CYGL041C 204 nt3.26□□□□□ -1.89
NPL3Q01560 IRC23YOR044W 474 nt3.26□□□□□ -1.89 RIP-Chip
NPL3Q01560 YPL229WYPL229W 621 nt3.26□□□□□ -1.89
NPL3Q01560 TAF2YCR042C 4224 nt3.26□□□□□ -1.89
NPL3Q01560 VPS52YDR484W 1926 nt3.26□□□□□ -1.89
NPL3Q01560 MSS11YMR164C 2277 nt3.26□□□□□ -1.89 RIP-Chip
NPL3Q01560 DUF1YOL087C 3351 nt3.25□□□□□ -1.89
NPL3Q01560 YDR169C-AYDR169C-A 150 nt3.25□□□□□ -1.89
NPL3Q01560 tF(GAA)DtF(GAA)D 73 nt3.25□□□□□ -1.89
NPL3Q01560 tF(GAA)NtF(GAA)N 73 nt3.25□□□□□ -1.89
NPL3Q01560 YNL170WYNL170W 396 nt3.25□□□□□ -1.89
NPL3Q01560 MGR1YCL044C 1254 nt3.25□□□□□ -1.89 RIP-Chip
NPL3Q01560 AUS1YOR011W 4185 nt3.25□□□□□ -1.89
NPL3Q01560 YGL149WYGL149W 306 nt3.24□□□□□ -1.89
NPL3Q01560 PAU14YIL176C 363 nt3.24□□□□□ -1.89
NPL3Q01560 PAM16YJL104W 450 nt3.24□□□□□ -1.89 RIP-Chip
NPL3Q01560 PAU1YJL223C 363 nt3.24□□□□□ -1.89
NPL3Q01560 YLR154C-HYLR154C-H 132 nt3.24□□□□□ -1.89
NPL3Q01560 YLR156C-AYLR156C-A 132 nt3.24□□□□□ -1.89
NPL3Q01560 YLR157C-CYLR157C-C 132 nt3.24□□□□□ -1.89
NPL3Q01560 YLR159C-AYLR159C-A 132 nt3.24□□□□□ -1.89
NPL3Q01560 RPL9BYNL067W 576 nt3.24□□□□□ -1.89
NPL3Q01560 YOR073W-AYOR073W-A 234 nt3.24□□□□□ -1.89
NPL3Q01560 YBR085C-AYBR085C-A 258 nt3.24□□□□□ -1.89
NPL3Q01560 STU2YLR045C 2667 nt3.24□□□□□ -1.89
NPL3Q01560 NPR3YHL023C 3441 nt3.23□□□□□ -1.89
NPL3Q01560 YJL181WYJL181W 1836 nt3.23□□□□□ -1.89
NPL3Q01560 BAS1YKR099W 2436 nt3.23□□□□□ -1.89
NPL3Q01560 YDL041WYDL041W 354 nt3.23□□□□□ -1.89
NPL3Q01560 DLS1YJL065C 504 nt3.23□□□□□ -1.89 RIP-Chip
NPL3Q01560 GIS2YNL255C 462 nt3.23□□□□□ -1.89
NPL3Q01560 POL2YNL262W 6669 nt3.23□□□□□ -1.89
NPL3Q01560 CSR2YPR030W 3366 nt3.23□□□□□ -1.89
NPL3Q01560 PSK1YAL017W 4071 nt3.23□□□□□ -1.89
NPL3Q01560 ITC1YGL133W 3795 nt3.23□□□□□ -1.89
NPL3Q01560 YHR078WYHR078W 1659 nt3.23□□□□□ -1.89
NPL3Q01560 PUF4YGL014W 2667 nt3.23□□□□□ -1.89
NPL3Q01560 SKT5YBL061C 2091 nt3.23□□□□□ -1.89
NPL3Q01560 YEL025CYEL025C 3567 nt3.22□□□□□ -1.89
NPL3Q01560 PSO2YMR137C 1986 nt3.22□□□□□ -1.89
NPL3Q01560 YTA7YGR270W 4140 nt3.22□□□□□ -1.89
NPL3Q01560 PSF1YDR013W 627 nt3.22□□□□□ -1.89
NPL3Q01560 APQ12YIL040W 417 nt3.22□□□□□ -1.89 RIP-Chip
NPL3Q01560 YIL066W-AYIL066W-A 444 nt3.22□□□□□ -1.89
NPL3Q01560 RPA34YJL148W 702 nt3.22□□□□□ -1.89 RIP-Chip
NPL3Q01560 GPI14YJR013W 1212 nt3.22□□□□□ -1.89
NPL3Q01560 APC9YLR102C 798 nt3.22□□□□□ -1.89
NPL3Q01560 YLR458WYLR458W 381 nt3.22□□□□□ -1.89
NPL3Q01560 snR42snR42 351 nt3.22□□□□□ -1.89
NPL3Q01560 SNQ2YDR011W 4506 nt3.22□□□□□ -1.89
NPL3Q01560 MIT1YEL007W 2001 nt3.22□□□□□ -1.89
NPL3Q01560 PSY2YNL201C 2577 nt3.21□□□□□ -1.9
NPL3Q01560 DSE4YNR067C 3354 nt3.21□□□□□ -1.9
NPL3Q01560 REC8YPR007C 2043 nt3.21□□□□□ -1.9
NPL3Q01560 YDL211CYDL211C 1119 nt3.21□□□□□ -1.9
NPL3Q01560 ABF2YMR072W 552 nt3.21□□□□□ -1.9 RIP-Chip
NPL3Q01560 YOR011W-AYOR011W-A 207 nt3.21□□□□□ -1.9
NPL3Q01560 RCY1YJL204C 2523 nt3.21□□□□□ -1.9
NPL3Q01560 VAS1YGR094W 3315 nt3.21□□□□□ -1.9
NPL3Q01560 GCN1YGL195W 8019 nt3.2□□□□□ -1.9
NPL3Q01560 SKP2YNL311C 2292 nt3.2□□□□□ -1.9
NPL3Q01560 STE14YDR410C 720 nt3.2□□□□□ -1.9 RIP-Chip
NPL3Q01560 YFR056CYFR056C 369 nt3.2□□□□□ -1.9
NPL3Q01560 TMA22YJR014W 597 nt3.2□□□□□ -1.9
NPL3Q01560 RAM2YKL019W 951 nt3.2□□□□□ -1.9
NPL3Q01560 GOT1YMR292W 417 nt3.2□□□□□ -1.9
NPL3Q01560 TSC11YER093C 4293 nt3.2□□□□□ -1.9
NPL3Q01560 STT4YLR305C 5703 nt3.19□□□□□ -1.9
NPL3Q01560 YDR344CYDR344C 444 nt3.19□□□□□ -1.9
NPL3Q01560 TMA10YLR327C 261 nt3.19□□□□□ -1.9
NPL3Q01560 CCW14YLR390W-A 717 nt3.19□□□□□ -1.9
NPL3Q01560 RPS18BYML026C 441 nt3.19□□□□□ -1.9
NPL3Q01560 YBL073WYBL073W 312 nt3.19□□□□□ -1.9
NPL3Q01560 TRM7YBR061C 933 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 28.6 ms