Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 YHR213W-BYHR213W-B 300 nt5.52□□□□□ -1.53
YCK3P39962 YAR064WYAR064W 300 nt5.52□□□□□ -1.53
YCK3P39962 YOR318CYOR318C 306 nt5.52□□□□□ -1.53
YCK3P39962 YBR196C-AYBR196C-A 150 nt5.52□□□□□ -1.53
YCK3P39962 snR39BsnR39B 96 nt5.52□□□□□ -1.53
YCK3P39962 CYK3YDL117W 2658 nt5.52□□□□□ -1.53
YCK3P39962 BIR1YJR089W 2865 nt5.52□□□□□ -1.53
YCK3P39962 FOX2YKR009C 2703 nt5.52□□□□□ -1.53
YCK3P39962 DOT6YER088C 2013 nt5.52□□□□□ -1.53
YCK3P39962 RPS15YOL040C 429 nt5.51□□□□□ -1.53
YCK3P39962 HIR2YOR038C 2628 nt5.51□□□□□ -1.53
YCK3P39962 YJL181WYJL181W 1836 nt5.51□□□□□ -1.53
YCK3P39962 UTP14YML093W 2700 nt5.5□□□□□ -1.53
YCK3P39962 TRK2YKR050W 2670 nt5.5□□□□□ -1.53
YCK3P39962 YIL058WYIL058W 285 nt5.5□□□□□ -1.53
YCK3P39962 YLR154C-HYLR154C-H 132 nt5.5□□□□□ -1.53
YCK3P39962 YLR156C-AYLR156C-A 132 nt5.5□□□□□ -1.53
YCK3P39962 YLR157C-CYLR157C-C 132 nt5.5□□□□□ -1.53
YCK3P39962 YLR159C-AYLR159C-A 132 nt5.5□□□□□ -1.53
YCK3P39962 ARG81YML099C 2643 nt5.49□□□□□ -1.53
YCK3P39962 RPL42AYNL162W 321 nt5.49□□□□□ -1.53
YCK3P39962 UBP11YKR098C 2154 nt5.49□□□□□ -1.53
YCK3P39962 LEU3YLR451W 2661 nt5.49□□□□□ -1.53
YCK3P39962 SKI7YOR076C 2244 nt5.48□□□□□ -1.53
YCK3P39962 EDE1YBL047C 4146 nt5.48□□□□□ -1.53
YCK3P39962 MSC6YOR354C 2079 nt5.48□□□□□ -1.53
YCK3P39962 YGR122C-AYGR122C-A 129 nt5.48□□□□□ -1.53
YCK3P39962 YNL285WYNL285W 372 nt5.48□□□□□ -1.53
YCK3P39962 VPH1YOR270C 2523 nt5.47□□□□□ -1.53
YCK3P39962 SIP1YDR422C 2448 nt5.47□□□□□ -1.53
YCK3P39962 AMD1YML035C 2433 nt5.47□□□□□ -1.53
YCK3P39962 REB1YBR049C 2433 nt5.47□□□□□ -1.53
YCK3P39962 TUP1YCR084C 2142 nt5.47□□□□□ -1.53
YCK3P39962 QNS1YHR074W 2145 nt5.47□□□□□ -1.53
YCK3P39962 MCM4YPR019W 2802 nt5.47□□□□□ -1.53
YCK3P39962 PHM7YOL084W 2976 nt5.47□□□□□ -1.53
YCK3P39962 GRS1YBR121C 2004 nt5.47□□□□□ -1.53
YCK3P39962 DOA4YDR069C 2781 nt5.46□□□□□ -1.53
YCK3P39962 YFR016CYFR016C 3702 nt5.46□□□□□ -1.53
YCK3P39962 SYG1YIL047C 2709 nt5.46□□□□□ -1.54
YCK3P39962 RPS30BYOR182C 192 nt5.46□□□□□ -1.54
YCK3P39962 YPL250W-AYPL250W-A 288 nt5.46□□□□□ -1.54
YCK3P39962 RAD3YER171W 2337 nt5.45□□□□□ -1.54
YCK3P39962 YEL068CYEL068C 333 nt5.45□□□□□ -1.54
YCK3P39962 MBB1YJL199C 327 nt5.45□□□□□ -1.54
YCK3P39962 YLR286W-AYLR286W-A 135 nt5.45□□□□□ -1.54
YCK3P39962 YMR122CYMR122C 375 nt5.45□□□□□ -1.54
YCK3P39962 HSH155YMR288W 2916 nt5.45□□□□□ -1.54
YCK3P39962 PIP2YOR363C 2991 nt5.45□□□□□ -1.54
YCK3P39962 AAP1YHR047C 2571 nt5.45□□□□□ -1.54
YCK3P39962 YCR043CYCR043C 384 nt5.44□□□□□ -1.54
YCK3P39962 SUF5tG(CCC)O 72 nt5.44□□□□□ -1.54
YCK3P39962 RGM1YMR182C 636 nt5.44□□□□□ -1.54
YCK3P39962 COX5AYNL052W 462 nt5.44□□□□□ -1.54
YCK3P39962 DIA2YOR080W 2199 nt5.44□□□□□ -1.54
YCK3P39962 PHO87YCR037C 2772 nt5.44□□□□□ -1.54
YCK3P39962 YJL070CYJL070C 2667 nt5.43□□□□□ -1.54
YCK3P39962 YPL062WYPL062W 405 nt5.43□□□□□ -1.54
YCK3P39962 SUM1YDR310C 3189 nt5.43□□□□□ -1.54
YCK3P39962 SEC1YDR164C 2175 nt5.42□□□□□ -1.54
YCK3P39962 OAF1YAL051W 3144 nt5.42□□□□□ -1.54
YCK3P39962 HSP104YLL026W 2727 nt5.42□□□□□ -1.54
YCK3P39962 RAD16YBR114W 2373 nt5.42□□□□□ -1.54
YCK3P39962 RTT107YHR154W 3213 nt5.42□□□□□ -1.54
YCK3P39962 RPN2YIL075C 2838 nt5.41□□□□□ -1.54
YCK3P39962 tM(CAU)Q2tM(CAU)Q2 78 nt5.41□□□□□ -1.54
YCK3P39962 BRO1YPL084W 2535 nt5.41□□□□□ -1.54
YCK3P39962 SNF5YBR289W 2718 nt5.4□□□□□ -1.54
YCK3P39962 PAU3YCR104W 375 nt5.4□□□□□ -1.54
YCK3P39962 YDL085C-AYDL085C-A 207 nt5.4□□□□□ -1.54
YCK3P39962 ISW2YOR304W 3363 nt5.4□□□□□ -1.55
YCK3P39962 MEF2YJL102W 2460 nt5.39□□□□□ -1.55
YCK3P39962 CCM1YGR150C 2595 nt5.39□□□□□ -1.55
YCK3P39962 ACB1YGR037C 264 nt5.39□□□□□ -1.55
YCK3P39962 POP1YNL221C 2628 nt5.39□□□□□ -1.55
YCK3P39962 SPO75YLL005C 2607 nt5.38□□□□□ -1.55
YCK3P39962 RPS25BYLR333C 327 nt5.37□□□□□ -1.55
YCK3P39962 RIX7YLL034C 2514 nt5.36□□□□□ -1.55
YCK3P39962 YOL097W-AYOL097W-A 186 nt5.36□□□□□ -1.55
YCK3P39962 YPP1YGR198W 2454 nt5.36□□□□□ -1.55
YCK3P39962 YPL150WYPL150W 2706 nt5.36□□□□□ -1.55
YCK3P39962 KRS1YDR037W 1776 nt5.35□□□□□ -1.55
YCK3P39962 YBL012CYBL012C 402 nt5.35□□□□□ -1.55
YCK3P39962 AXL2YIL140W 2472 nt5.35□□□□□ -1.55
YCK3P39962 PDS5YMR076C 3834 nt5.35□□□□□ -1.55
YCK3P39962 ECM5YMR176W 4236 nt5.34□□□□□ -1.55
YCK3P39962 SYF1YDR416W 2580 nt5.33□□□□□ -1.56
YCK3P39962 EFT2YDR385W 2529 nt5.33□□□□□ -1.56
YCK3P39962 EFT1YOR133W 2529 nt5.33□□□□□ -1.56
YCK3P39962 SIN4YNL236W 2925 nt5.33□□□□□ -1.56
YCK3P39962 YLR416CYLR416C 399 nt5.33□□□□□ -1.56
YCK3P39962 ARG5,6YER069W 2592 nt5.33□□□□□ -1.56
YCK3P39962 GEF1YJR040W 2340 nt5.32□□□□□ -1.56
YCK3P39962 VPS70YJR126C 2436 nt5.32□□□□□ -1.56
YCK3P39962 FAA2YER015W 2235 nt5.32□□□□□ -1.56
YCK3P39962 ROG3YFR022W 2202 nt5.31□□□□□ -1.56
YCK3P39962 YPR195CYPR195C 330 nt5.31□□□□□ -1.56
YCK3P39962 CHL1YPL008W 2586 nt5.31□□□□□ -1.56
YCK3P39962 YLL067CYLL067C 3618 nt5.3□□□□□ -1.56
YCK3P39962 KGD1YIL125W 3045 nt5.3□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 36.3 ms