Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 SEA4YBL104C 3117 nt3.35□□□□□ -1.87
PUB1P32588 GRS2YPR081C 1857 nt3.35□□□□□ -1.87
PUB1P32588 OSH2YDL019C 3852 nt3.34□□□□□ -1.87
PUB1P32588 CDC24YAL041W 2565 nt3.34□□□□□ -1.87
PUB1P32588 snR72snR72 98 nt3.34□□□□□ -1.87
PUB1P32588 snR79snR79 84 nt3.34□□□□□ -1.87
PUB1P32588 YNL103W-AYNL103W-A 90 nt3.34□□□□□ -1.87
PUB1P32588 YPR146CYPR146C 330 nt3.34□□□□□ -1.87
PUB1P32588 TRS120YDR407C 3870 nt3.34□□□□□ -1.88
PUB1P32588 CWC22YGR278W 1734 nt3.33□□□□□ -1.88
PUB1P32588 TRZ1YKR079C 2517 nt3.33□□□□□ -1.88
PUB1P32588 VIP1YLR410W 3441 nt3.33□□□□□ -1.88
PUB1P32588 TFB1YDR311W 1929 nt3.33□□□□□ -1.88 RIP-Chip
PUB1P32588 PDC2YDR081C 2778 nt3.33□□□□□ -1.88
PUB1P32588 SPI1YER150W 447 nt3.33□□□□□ -1.88 RIP-Chip
PUB1P32588 YGL239CYGL239C 315 nt3.33□□□□□ -1.88
PUB1P32588 YBR141W-AYBR141W-A 96 nt3.33□□□□□ -1.88
PUB1P32588 PUF6YDR496C 1971 nt3.32□□□□□ -1.88
PUB1P32588 YPR022CYPR022C 3402 nt3.32□□□□□ -1.88
PUB1P32588 TCO89YPL180W 2400 nt3.32□□□□□ -1.88
PUB1P32588 ISM1YPL040C 3009 nt3.32□□□□□ -1.88
PUB1P32588 snR74snR74 88 nt3.32□□□□□ -1.88
PUB1P32588 RPS27AYKL156W 249 nt3.32□□□□□ -1.88
PUB1P32588 YPR092WYPR092W 306 nt3.32□□□□□ -1.88
PUB1P32588 OM14YBR230C 405 nt3.32□□□□□ -1.88 RIP-Chip
PUB1P32588 NUP159YIL115C 4383 nt3.32□□□□□ -1.88
PUB1P32588 TCB3YML072C 4638 nt3.32□□□□□ -1.88
PUB1P32588 YPR003CYPR003C 2265 nt3.32□□□□□ -1.88
PUB1P32588 MTR10YOR160W 2919 nt3.32□□□□□ -1.88
PUB1P32588 YGL140CYGL140C 3660 nt3.32□□□□□ -1.88
PUB1P32588 SSM4YIL030C 3960 nt3.32□□□□□ -1.88 RIP-Chip
PUB1P32588 YPK1YKL126W 2043 nt3.31□□□□□ -1.88
PUB1P32588 SPA2YLL021W 4401 nt3.31□□□□□ -1.88
PUB1P32588 YKL156C-AYKL156C-A 117 nt3.31□□□□□ -1.88
PUB1P32588 TAF1YGR274C 3201 nt3.31□□□□□ -1.88
PUB1P32588 COP1YDL145C 3606 nt3.31□□□□□ -1.88
PUB1P32588 URA2YJL130C 6645 nt3.3□□□□□ -1.88 RIP-Chip
PUB1P32588 KEL2YGR238C 2649 nt3.3□□□□□ -1.88
PUB1P32588 RED1YLR263W 2484 nt3.3□□□□□ -1.88
PUB1P32588 IOC2YLR095C 2439 nt3.3□□□□□ -1.88
PUB1P32588 LCD1YDR499W 2244 nt3.3□□□□□ -1.88
PUB1P32588 FAA2YER015W 2235 nt3.3□□□□□ -1.88
PUB1P32588 PMP2YEL017C-A 132 nt3.3□□□□□ -1.88 RIP-Chip
PUB1P32588 YPR053CYPR053C 456 nt3.3□□□□□ -1.88 RIP-Chip
PUB1P32588 RDS1YCR106W 2499 nt3.3□□□□□ -1.88
PUB1P32588 YRM1YOR172W 2361 nt3.3□□□□□ -1.88
PUB1P32588 MPS1YDL028C 2295 nt3.3□□□□□ -1.88 RIP-Chip
PUB1P32588 FAA1YOR317W 2103 nt3.29□□□□□ -1.88 RIP-Chip
PUB1P32588 STU1YBL034C 4542 nt3.29□□□□□ -1.88 RIP-Chip
PUB1P32588 MSR1YHR091C 1932 nt3.29□□□□□ -1.88
PUB1P32588 YIR030W-AYIR030W-A 384 nt3.29□□□□□ -1.88
PUB1P32588 ANB1YJR047C 474 nt3.29□□□□□ -1.88 RIP-Chip
PUB1P32588 YKL165C-AYKL165C-A 234 nt3.29□□□□□ -1.88
PUB1P32588 LSM7YNL147W 348 nt3.29□□□□□ -1.88
PUB1P32588 SNC2YOR327C 348 nt3.29□□□□□ -1.88
PUB1P32588 YBR121C-AYBR121C-A 159 nt3.29□□□□□ -1.88
PUB1P32588 IOC3YFR013W 2364 nt3.29□□□□□ -1.88
PUB1P32588 CDC27YBL084C 2277 nt3.28□□□□□ -1.88
PUB1P32588 APC2YLR127C 2562 nt3.28□□□□□ -1.88
PUB1P32588 TCP1YDR212W 1680 nt3.28□□□□□ -1.88
PUB1P32588 YGR237CYGR237C 2358 nt3.28□□□□□ -1.88
PUB1P32588 SSS1YDR086C 243 nt3.28□□□□□ -1.88
PUB1P32588 tV(CAC)DtV(CAC)D 73 nt3.28□□□□□ -1.88
PUB1P32588 tV(CAC)HtV(CAC)H 73 nt3.28□□□□□ -1.88
PUB1P32588 RPS17AYML024W 411 nt3.28□□□□□ -1.88
PUB1P32588 FUN12YAL035W 3009 nt3.28□□□□□ -1.88
PUB1P32588 NAT1YDL040C 2565 nt3.28□□□□□ -1.88
PUB1P32588 YJL181WYJL181W 1836 nt3.28□□□□□ -1.88
PUB1P32588 CDH1YGL003C 1701 nt3.27□□□□□ -1.89
PUB1P32588 KIP3YGL216W 2418 nt3.27□□□□□ -1.89 RIP-Chip
PUB1P32588 GPI1YGR216C 1830 nt3.27□□□□□ -1.89 RIP-Chip
PUB1P32588 BCK2YER167W 2556 nt3.27□□□□□ -1.89
PUB1P32588 MSD1YPL104W 1977 nt3.27□□□□□ -1.89
PUB1P32588 IMH1YLR309C 2736 nt3.27□□□□□ -1.89
PUB1P32588 ASG1YIL130W 2895 nt3.26□□□□□ -1.89 RIP-Chip
PUB1P32588 PDS5YMR076C 3834 nt3.26□□□□□ -1.89
PUB1P32588 SPO21YOL091W 1830 nt3.26□□□□□ -1.89
PUB1P32588 RBK1YCR036W 1002 nt3.26□□□□□ -1.89
PUB1P32588 ALA1YOR335C 2877 nt3.26□□□□□ -1.89
PUB1P32588 ARK1YNL020C 1917 nt3.25□□□□□ -1.89
PUB1P32588 RRN6YBL014C 2685 nt3.25□□□□□ -1.89
PUB1P32588 PMP1YCR024C-A 123 nt3.25□□□□□ -1.89 RIP-Chip
PUB1P32588 ULI1YFR026C 510 nt3.25□□□□□ -1.89
PUB1P32588 YIL058WYIL058W 285 nt3.25□□□□□ -1.89
PUB1P32588 RPL38YLR325C 237 nt3.25□□□□□ -1.89
PUB1P32588 SGF11YPL047W 300 nt3.25□□□□□ -1.89 RIP-Chip
PUB1P32588 YPR108W-AYPR108W-A 213 nt3.25□□□□□ -1.89
PUB1P32588 YNL034WYNL034W 1839 nt3.24□□□□□ -1.89
PUB1P32588 GEP4YHR100C 558 nt3.24□□□□□ -1.89 RIP-Chip
PUB1P32588 NCL1YBL024W 2055 nt3.24□□□□□ -1.89
PUB1P32588 IPT1YDR072C 1584 nt3.24□□□□□ -1.89 RIP-Chip
PUB1P32588 GSC2YGR032W 5688 nt3.23□□□□□ -1.89 RIP-Chip
PUB1P32588 YEL073CYEL073C 324 nt3.23□□□□□ -1.89
PUB1P32588 YER121WYER121W 345 nt3.23□□□□□ -1.89
PUB1P32588 YIL059CYIL059C 366 nt3.23□□□□□ -1.89
PUB1P32588 SWC7YLR385C 399 nt3.23□□□□□ -1.89
PUB1P32588 RPS8AYBL072C 603 nt3.23□□□□□ -1.89 RIP-Chip
PUB1P32588 MUK1YPL070W 1839 nt3.23□□□□□ -1.89
PUB1P32588 VPS54YDR027C 2670 nt3.23□□□□□ -1.89
PUB1P32588 MTR4YJL050W 3222 nt3.23□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 82.1 ms