Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 MOT1YPL082C 5604 nt2.54□□□□□ -2
TY2A-FP0CX61 MMS1YPR164W 4224 nt2.54□□□□□ -2
TY2A-FP0CX61 YGL014C-AYGL014C-A 162 nt2.54□□□□□ -2
TY2A-FP0CX61 NFU1YKL040C 771 nt2.54□□□□□ -2
TY2A-FP0CX61 YLR031WYLR031W 561 nt2.54□□□□□ -2
TY2A-FP0CX61 PRE8YML092C 753 nt2.54□□□□□ -2
TY2A-FP0CX61 TOM1YDR457W 9807 nt2.54□□□□□ -2
TY2A-FP0CX61 RIF1YBR275C 5751 nt2.54□□□□□ -2
TY2A-FP0CX61 DNA2YHR164C 4569 nt2.54□□□□□ -2
TY2A-FP0CX61 AMS1YGL156W 3252 nt2.54□□□□□ -2
TY2A-FP0CX61 SNX41YDR425W 1878 nt2.54□□□□□ -2
TY2A-FP0CX61 GIN4YDR507C 3429 nt2.54□□□□□ -2
TY2A-FP0CX61 SRB8YCR081W 4284 nt2.54□□□□□ -2
TY2A-FP0CX61 VPS52YDR484W 1926 nt2.53□□□□□ -2
TY2A-FP0CX61 YER068C-AYER068C-A 432 nt2.53□□□□□ -2
TY2A-FP0CX61 YFR056CYFR056C 369 nt2.53□□□□□ -2
TY2A-FP0CX61 Q0142Q0142 177 nt2.53□□□□□ -2
TY2A-FP0CX61 YGR050CYGR050C 357 nt2.53□□□□□ -2
TY2A-FP0CX61 VOA1YGR106C 798 nt2.53□□□□□ -2
TY2A-FP0CX61 YHR138CYHR138C 345 nt2.53□□□□□ -2
TY2A-FP0CX61 AYR1YIL124W 894 nt2.53□□□□□ -2
TY2A-FP0CX61 PET191YJR034W 327 nt2.53□□□□□ -2
TY2A-FP0CX61 YOR392WYOR392W 444 nt2.53□□□□□ -2
TY2A-FP0CX61 RLI1YDR091C 1827 nt2.53□□□□□ -2
TY2A-FP0CX61 CDC20YGL116W 1833 nt2.53□□□□□ -2
TY2A-FP0CX61 PTC5YOR090C 1719 nt2.53□□□□□ -2
TY2A-FP0CX61 UBP11YKR098C 2154 nt2.53□□□□□ -2
TY2A-FP0CX61 ESL1YIL151C 3357 nt2.52□□□□□ -2.01
TY2A-FP0CX61 VPS16YPL045W 2397 nt2.52□□□□□ -2.01
TY2A-FP0CX61 HOS4YIL112W 3252 nt2.52□□□□□ -2.01
TY2A-FP0CX61 YDL041WYDL041W 354 nt2.52□□□□□ -2.01
TY2A-FP0CX61 SWF1YDR126W 1011 nt2.52□□□□□ -2.01
TY2A-FP0CX61 ACB1YGR037C 264 nt2.52□□□□□ -2.01
TY2A-FP0CX61 RPL14BYHL001W 417 nt2.52□□□□□ -2.01
TY2A-FP0CX61 YHL009W-AYHL009W-A 1242 nt2.52□□□□□ -2.01
TY2A-FP0CX61 COX7YMR256C 183 nt2.52□□□□□ -2.01
TY2A-FP0CX61 MRPL33YMR286W 261 nt2.52□□□□□ -2.01
TY2A-FP0CX61 YNL010WYNL010W 726 nt2.52□□□□□ -2.01
TY2A-FP0CX61 YOR053WYOR053W 342 nt2.52□□□□□ -2.01
TY2A-FP0CX61 YOR293C-AYOR293C-A 150 nt2.52□□□□□ -2.01
TY2A-FP0CX61 YPL261CYPL261C 309 nt2.52□□□□□ -2.01
TY2A-FP0CX61 PFF1YBR074W 2931 nt2.52□□□□□ -2.01
TY2A-FP0CX61 INP53YOR109W 3324 nt2.52□□□□□ -2.01
TY2A-FP0CX61 INP51YIL002C 2841 nt2.51□□□□□ -2.01
TY2A-FP0CX61 NCL1YBL024W 2055 nt2.51□□□□□ -2.01
TY2A-FP0CX61 SAK1YER129W 3429 nt2.51□□□□□ -2.01
TY2A-FP0CX61 YDL025W-AYDL025W-A 105 nt2.51□□□□□ -2.01
TY2A-FP0CX61 MZM1YDR493W 372 nt2.51□□□□□ -2.01
TY2A-FP0CX61 YER076W-AYER076W-A 348 nt2.51□□□□□ -2.01
TY2A-FP0CX61 YHR139C-AYHR139C-A 312 nt2.51□□□□□ -2.01
TY2A-FP0CX61 ROX1YPR065W 1107 nt2.51□□□□□ -2.01
TY2A-FP0CX61 YBR285WYBR285W 435 nt2.51□□□□□ -2.01
TY2A-FP0CX61 REV1YOR346W 2958 nt2.51□□□□□ -2.01
TY2A-FP0CX61 YJL070CYJL070C 2667 nt2.51□□□□□ -2.01
TY2A-FP0CX61 SEC7YDR170C 6030 nt2.5□□□□□ -2.01
TY2A-FP0CX61 RSE1YML049C 4086 nt2.5□□□□□ -2.01
TY2A-FP0CX61 SPC72YAL047C 1869 nt2.5□□□□□ -2.01
TY2A-FP0CX61 tR(ACG)Q2tR(ACG)Q2 74 nt2.5□□□□□ -2.01
TY2A-FP0CX61 YHR086W-AYHR086W-A 162 nt2.5□□□□□ -2.01
TY2A-FP0CX61 YKL066WYKL066W 444 nt2.5□□□□□ -2.01
TY2A-FP0CX61 ATP3YBR039W 936 nt2.5□□□□□ -2.01
TY2A-FP0CX61 YIL080WYIL080W 4722 nt2.5□□□□□ -2.01
TY2A-FP0CX61 MSS11YMR164C 2277 nt2.49□□□□□ -2.01
TY2A-FP0CX61 IRC10YOL015W 1761 nt2.49□□□□□ -2.01
TY2A-FP0CX61 RRP12YPL012W 3687 nt2.49□□□□□ -2.01
TY2A-FP0CX61 FMP16YDR070C 282 nt2.49□□□□□ -2.01
TY2A-FP0CX61 YDR250CYDR250C 276 nt2.49□□□□□ -2.01
TY2A-FP0CX61 SDH7YDR511W 402 nt2.49□□□□□ -2.01
TY2A-FP0CX61 GIM4YEL003W 336 nt2.49□□□□□ -2.01
TY2A-FP0CX61 LSM7YNL147W 348 nt2.49□□□□□ -2.01
TY2A-FP0CX61 PTP3YER075C 2787 nt2.49□□□□□ -2.01
TY2A-FP0CX61 HSC82YMR186W 2118 nt2.48□□□□□ -2.01
TY2A-FP0CX61 PRK1YIL095W 2433 nt2.48□□□□□ -2.01
TY2A-FP0CX61 MPH1YIR002C 2982 nt2.48□□□□□ -2.01
TY2A-FP0CX61 SDC1YDR469W 528 nt2.48□□□□□ -2.01
TY2A-FP0CX61 YAL068W-AYAL068W-A 255 nt2.48□□□□□ -2.01
TY2A-FP0CX61 RPS22BYLR367W 393 nt2.48□□□□□ -2.01
TY2A-FP0CX61 PDR1YGL013C 3207 nt2.48□□□□□ -2.01
TY2A-FP0CX61 MKT1YNL085W 2493 nt2.48□□□□□ -2.01
TY2A-FP0CX61 YNL018CYNL018C 1839 nt2.47□□□□□ -2.01
TY2A-FP0CX61 COX1Q0045 1605 nt2.47□□□□□ -2.01
TY2A-FP0CX61 YEL043WYEL043W 2871 nt2.47□□□□□ -2.01
TY2A-FP0CX61 SHE2YKL130C 741 nt2.47□□□□□ -2.01
TY2A-FP0CX61 YPL185WYPL185W 396 nt2.47□□□□□ -2.01
TY2A-FP0CX61 YBR277CYBR277C 402 nt2.47□□□□□ -2.01
TY2A-FP0CX61 IPT1YDR072C 1584 nt2.47□□□□□ -2.01
TY2A-FP0CX61 YDR186CYDR186C 2634 nt2.47□□□□□ -2.01
TY2A-FP0CX61 CBF2YGR140W 2871 nt2.47□□□□□ -2.01
TY2A-FP0CX61 NAN1YPL126W 2691 nt2.46□□□□□ -2.01
TY2A-FP0CX61 SMY2YBR172C 2223 nt2.46□□□□□ -2.01
TY2A-FP0CX61 MSL5YLR116W 1431 nt2.46□□□□□ -2.02
TY2A-FP0CX61 ESC1YMR219W 4977 nt2.46□□□□□ -2.02
TY2A-FP0CX61 snR79snR79 84 nt2.46□□□□□ -2.02
TY2A-FP0CX61 GRX8YLR364W 330 nt2.46□□□□□ -2.02
TY2A-FP0CX61 YOR050CYOR050C 348 nt2.46□□□□□ -2.02
TY2A-FP0CX61 YOR192C-CYOR192C-C 237 nt2.46□□□□□ -2.02
TY2A-FP0CX61 EGD1YPL037C 474 nt2.46□□□□□ -2.02
TY2A-FP0CX61 DAS1YJL149W 1992 nt2.46□□□□□ -2.02
TY2A-FP0CX61 SAP1YER047C 2694 nt2.46□□□□□ -2.02
TY2A-FP0CX61 SWA2YDR320C 2007 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 48.9 ms