Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ITM2AO43736 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
ITM2AO43736 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ITM2AO43736 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ITM2AO43736 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.01■□□□□ 0.79
ITM2AO43736 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 AL020996.1-203ENST00000536896 2307 ntBASIC20.01■□□□□ 0.79
ITM2AO43736 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.01■□□□□ 0.79
ITM2AO43736 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.01■□□□□ 0.79
ITM2AO43736 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
ITM2AO43736 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.01■□□□□ 0.79
ITM2AO43736 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITM2AO43736 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ITM2AO43736 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ITM2AO43736 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20■□□□□ 0.79
ITM2AO43736 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
ITM2AO43736 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20■□□□□ 0.79
ITM2AO43736 MIR2861-201ENST00000636310 90 ntBASIC20■□□□□ 0.79
ITM2AO43736 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20■□□□□ 0.79
ITM2AO43736 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ITM2AO43736 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ITM2AO43736 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20■□□□□ 0.79
ITM2AO43736 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITM2AO43736 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20■□□□□ 0.79
ITM2AO43736 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ITM2AO43736 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ITM2AO43736 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ITM2AO43736 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ITM2AO43736 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ITM2AO43736 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.99■□□□□ 0.79
ITM2AO43736 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
ITM2AO43736 AP001330.3-201ENST00000520123 633 ntBASIC19.99■□□□□ 0.79
ITM2AO43736 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.99■□□□□ 0.79
ITM2AO43736 TPRG1LP1-201ENST00000598702 760 ntBASIC19.99■□□□□ 0.79
ITM2AO43736 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITM2AO43736 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
ITM2AO43736 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ITM2AO43736 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ITM2AO43736 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ITM2AO43736 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.98■□□□□ 0.79
ITM2AO43736 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ITM2AO43736 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.98■□□□□ 0.79
ITM2AO43736 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.98■□□□□ 0.79
ITM2AO43736 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.98■□□□□ 0.79
ITM2AO43736 AC012414.1-201ENST00000556676 535 ntBASIC19.98■□□□□ 0.79
ITM2AO43736 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.98■□□□□ 0.79
ITM2AO43736 AC008175.2-201ENST00000612840 297 ntBASIC19.98■□□□□ 0.79
ITM2AO43736 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.98■□□□□ 0.79
ITM2AO43736 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.98■□□□□ 0.79
ITM2AO43736 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.98■□□□□ 0.79
ITM2AO43736 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITM2AO43736 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ITM2AO43736 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.97■□□□□ 0.79
ITM2AO43736 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.97■□□□□ 0.79
ITM2AO43736 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ITM2AO43736 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.97■□□□□ 0.79
ITM2AO43736 AC098818.2-201ENST00000564925 2320 ntBASIC19.97■□□□□ 0.79
ITM2AO43736 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITM2AO43736 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ITM2AO43736 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.97■□□□□ 0.79
ITM2AO43736 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms