Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRGV1A0A0A0MS02 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 AC137761.2-201ENST00000561729 223 ntBASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 RARRES2P6-201ENST00000567333 442 ntBASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 AC145350.3-201ENST00000569033 163 ntBASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 KRT18P61-201ENST00000585825 1298 ntBASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRGV1A0A0A0MS02 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 AC007225.1-201ENST00000566331 1836 ntBASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 AC116050.2-201ENST00000612102 1779 ntBASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 MYCNOS-205ENST00000641950 531 ntBASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRGV1A0A0A0MS02 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV1A0A0A0MS02 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms