Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 ZNF92P3-201ENST00000596594 954 ntBASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 ZNF92P2-201ENST00000600543 1059 ntBASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 AC006328.2-201ENST00000623198 397 ntBASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 AC073578.4-201ENST00000623945 514 ntBASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 AC012005.2-201ENST00000624333 397 ntBASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AL353718.1-201ENST00000451028 517 ntBASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AC097487.1-201ENST00000514134 934 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AL139021.1-201ENST00000556734 436 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AC022306.2-201ENST00000617563 647 ntBASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AC068620.4-201ENST00000636730 1182 ntBASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
KRTAP4-4Q9BYR3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 SERPINA9-201ENST00000298845 1423 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 MTCO2P31-201ENST00000402702 684 ntBASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 AC013469.1-201ENST00000426985 403 ntBASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 MTND4P25-201ENST00000441039 533 ntBASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 SNORA59B-202ENST00000578183 701 ntBASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 AL512356.3-201ENST00000623005 461 ntBASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
KRTAP4-4Q9BYR3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 AC097478.2-201ENST00000610572 514 ntBASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC5.22□□□□□ -1.57
KRTAP4-4Q9BYR3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP4-4Q9BYR3 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
KRTAP4-4Q9BYR3 MTCO1P6-201ENST00000481192 1384 ntBASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AP000568.1-201ENST00000282964 442 ntBASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 HSFY1P1-201ENST00000423928 1178 ntBASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AL845331.1-201ENST00000424978 1190 ntBASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 MTND2P3-201ENST00000452458 470 ntBASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AC110792.4-201ENST00000609843 298 ntBASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 AC090246.1-201ENST00000616499 426 ntBASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
KRTAP4-4Q9BYR3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 AL133445.2-201ENST00000611191 527 ntBASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP4-4Q9BYR3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC5.19□□□□□ -1.58
KRTAP4-4Q9BYR3 AC082651.2-201ENST00000496833 166 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms