RNA–Protein interactions for RNA: ENST00000449250.3

C17orf58-202, Transcript of chromosome 17 open reading frame 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C17orf58, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf58-202ENST00000449250 AEBP2Q6ZN18 517 aaPredicted RBP35.17■■■■□ 3.22
C17orf58-202ENST00000449250 NISCHQ9Y2I1 1504 aa33.85■■■■□ 3.01
C17orf58-202ENST00000449250 CHIC1Q5VXU3 224 aa33.09■■■□□ 2.89
C17orf58-202ENST00000449250 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
C17orf58-202ENST00000449250 ABCC9O60706 1549 aa30.32■■■□□ 2.44
C17orf58-202ENST00000449250 SENP3Q9H4L4 574 aaPredicted RBP30.12■■■□□ 2.41
C17orf58-202ENST00000449250 PHF23Q9BUL5 403 aaPredicted RBP29.67■■■□□ 2.34
C17orf58-202ENST00000449250 RB1CC1Q8TDY2 1594 aa28.97■■■□□ 2.23
C17orf58-202ENST00000449250 NACADO15069 1562 aa28.81■■■□□ 2.2
C17orf58-202ENST00000449250 MYO15BQ96JP2 1530 aa28.51■■■□□ 2.15
C17orf58-202ENST00000449250 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
C17orf58-202ENST00000449250 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
C17orf58-202ENST00000449250 PABPN1Q86U42 306 aaKnown RBP eCLIP28.2■■■□□ 2.1
C17orf58-202ENST00000449250 UNC13AQ9UPW8 1703 aa28.17■■■□□ 2.1
C17orf58-202ENST00000449250 DCAF1Q9Y4B6 1507 aa28.08■■■□□ 2.09
C17orf58-202ENST00000449250 FOXD1Q16676 465 aa28.08■■■□□ 2.09
C17orf58-202ENST00000449250 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
C17orf58-202ENST00000449250 ZCCHC6Q5VYS8 1495 aaKnown RBP28.05■■■□□ 2.08
C17orf58-202ENST00000449250 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
C17orf58-202ENST00000449250 SCRIBQ14160 1630 aa27.55■■■□□ 2
C17orf58-202ENST00000449250 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
C17orf58-202ENST00000449250 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
C17orf58-202ENST00000449250 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.98
C17orf58-202ENST00000449250 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
C17orf58-202ENST00000449250 MSH5O43196 834 aa26.46■■□□□ 1.83
C17orf58-202ENST00000449250 ATAD2BQ9ULI0 1458 aa26.46■■□□□ 1.83
C17orf58-202ENST00000449250 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
C17orf58-202ENST00000449250 POTEDQ86YR6 584 aa26.39■■□□□ 1.82
C17orf58-202ENST00000449250 HMGXB3Q12766 1538 aa26.39■■□□□ 1.81
C17orf58-202ENST00000449250 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
C17orf58-202ENST00000449250 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
C17orf58-202ENST00000449250 CUX2O14529 1486 aa26.31■■□□□ 1.8
C17orf58-202ENST00000449250 PLPPR3Q6T4P5 718 aa26.31■■□□□ 1.8
C17orf58-202ENST00000449250 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
C17orf58-202ENST00000449250 PEG3Q9GZU2 1588 aa26.23■■□□□ 1.79
C17orf58-202ENST00000449250 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
C17orf58-202ENST00000449250 PIAS4Q8N2W9 510 aaPredicted RBP26.18■■□□□ 1.78
C17orf58-202ENST00000449250 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
C17orf58-202ENST00000449250 MROH2BQ7Z745 1585 aa26.02■■□□□ 1.76
C17orf58-202ENST00000449250 NESP48681 1621 aa26.02■■□□□ 1.76
C17orf58-202ENST00000449250 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
C17orf58-202ENST00000449250 PPP6R1Q9UPN7 881 aa25.97■■□□□ 1.75
C17orf58-202ENST00000449250 ADRA2BP18089 450 aa25.89■■□□□ 1.74
C17orf58-202ENST00000449250 PDS5BQ9NTI5 1447 aa25.85■■□□□ 1.73
C17orf58-202ENST00000449250 THOC2Q8NI27 1593 aaKnown RBP25.83■■□□□ 1.73
C17orf58-202ENST00000449250 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
C17orf58-202ENST00000449250 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
C17orf58-202ENST00000449250 WIZO95785 1651 aa25.64■■□□□ 1.7
C17orf58-202ENST00000449250 MRC2Q9UBG0 1479 aa25.58■■□□□ 1.69
C17orf58-202ENST00000449250 WDR62O43379 1518 aa25.53■■□□□ 1.68
C17orf58-202ENST00000449250 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
C17orf58-202ENST00000449250 CFTRP13569 1480 aa25.47■■□□□ 1.67
C17orf58-202ENST00000449250 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
C17orf58-202ENST00000449250 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
C17orf58-202ENST00000449250 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
C17orf58-202ENST00000449250 URB2Q14146 1524 aaKnown RBP25.18■■□□□ 1.62
C17orf58-202ENST00000449250 PRDM2Q13029 1718 aa25.12■■□□□ 1.61
C17orf58-202ENST00000449250 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
C17orf58-202ENST00000449250 OSCARQ8IYS5 282 aa25.07■■□□□ 1.6
C17orf58-202ENST00000449250 ABCC8Q09428 1581 aa25■■□□□ 1.59
C17orf58-202ENST00000449250 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
C17orf58-202ENST00000449250 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
C17orf58-202ENST00000449250 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
C17orf58-202ENST00000449250 ZNF608Q9ULD9 1512 aaPredicted RBP24.85■■□□□ 1.57
C17orf58-202ENST00000449250 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
C17orf58-202ENST00000449250 EIF4G3O43432 1585 aaKnown RBP24.72■■□□□ 1.55
C17orf58-202ENST00000449250 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
C17orf58-202ENST00000449250 POLA1P09884 1462 aaPredicted RBP24.67■■□□□ 1.54
C17orf58-202ENST00000449250 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.54
C17orf58-202ENST00000449250 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.54
C17orf58-202ENST00000449250 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.54
C17orf58-202ENST00000449250 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.53
C17orf58-202ENST00000449250 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
C17orf58-202ENST00000449250 WDR97A6NE52 1622 aa24.58■■□□□ 1.53
C17orf58-202ENST00000449250 SOGA1O94964 1423 aa24.57■■□□□ 1.52
C17orf58-202ENST00000449250 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
C17orf58-202ENST00000449250 FGD5Q6ZNL6 1462 aa24.49■■□□□ 1.51
C17orf58-202ENST00000449250 CHD1O14646 1710 aa24.49■■□□□ 1.51
C17orf58-202ENST00000449250 TDRD9Q8NDG6 1382 aaKnown RBP24.47■■□□□ 1.51
C17orf58-202ENST00000449250 CUX1P39880 1505 aa24.45■■□□□ 1.51
C17orf58-202ENST00000449250 FBLN2P98095 1184 aa24.43■■□□□ 1.5
C17orf58-202ENST00000449250 MAGI1Q96QZ7 1491 aaPredicted RBP24.42■■□□□ 1.5
C17orf58-202ENST00000449250 CYB5RLQ6IPT4 315 aa24.4■■□□□ 1.5
C17orf58-202ENST00000449250 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
C17orf58-202ENST00000449250 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
C17orf58-202ENST00000449250 ARAP1Q96P48 1450 aa24.35■■□□□ 1.49
C17orf58-202ENST00000449250 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
C17orf58-202ENST00000449250 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
C17orf58-202ENST00000449250 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
C17orf58-202ENST00000449250 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
C17orf58-202ENST00000449250 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
C17orf58-202ENST00000449250 GAPVD1Q14C86 1478 aa24.27■■□□□ 1.48
C17orf58-202ENST00000449250 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
C17orf58-202ENST00000449250 SUPT5HO00267 1087 aaKnown RBP24.19■■□□□ 1.46
C17orf58-202ENST00000449250 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
C17orf58-202ENST00000449250 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
C17orf58-202ENST00000449250 TRHP20396 242 aaPredicted RBP24.11■■□□□ 1.45
C17orf58-202ENST00000449250 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
C17orf58-202ENST00000449250 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
C17orf58-202ENST00000449250 GRIN2AQ12879 1464 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms