RNA–Protein interactions for RNA: ENST00000578206.1

LINC00511-205, long intergenic non-protein coding RNA 511, humanhuman

TSL 3 BASIC

Gene LINC00511, Length 908 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-205ENST00000578206 AEBP2Q6ZN18 517 aaPredicted RBP41.31■■■■■ 4.2
LINC00511-205ENST00000578206 CHIC1Q5VXU3 224 aa40.27■■■■■ 4.04
LINC00511-205ENST00000578206 PHF23Q9BUL5 403 aaPredicted RBP35.49■■■■□ 3.27
LINC00511-205ENST00000578206 SENP3Q9H4L4 574 aaPredicted RBP34.93■■■■□ 3.18
LINC00511-205ENST00000578206 PLPPR3Q6T4P5 718 aa32.99■■■□□ 2.87
LINC00511-205ENST00000578206 FOXD1Q16676 465 aa32.51■■■□□ 2.79
LINC00511-205ENST00000578206 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
LINC00511-205ENST00000578206 PPP6R1Q9UPN7 881 aa31.35■■■□□ 2.61
LINC00511-205ENST00000578206 ADRA2BP18089 450 aa31.31■■■□□ 2.6
LINC00511-205ENST00000578206 PIAS4Q8N2W9 510 aaPredicted RBP30.62■■■□□ 2.49
LINC00511-205ENST00000578206 MSH5O43196 834 aa29.87■■■□□ 2.37
LINC00511-205ENST00000578206 KCNA4P22459 653 aa29.68■■■□□ 2.34
LINC00511-205ENST00000578206 PPP4R3CPQ6ZMV5 832 aa29.18■■■□□ 2.26
LINC00511-205ENST00000578206 EHMT2Q96KQ7 1210 aa28.91■■■□□ 2.22
LINC00511-205ENST00000578206 NCBP3Q53F19 620 aaKnown RBP28.79■■■□□ 2.2
LINC00511-205ENST00000578206 SLC4A1APQ9BWU0 796 aaKnown RBP28.51■■■□□ 2.15
LINC00511-205ENST00000578206 SCAF1Q9H7N4 1312 aaKnown RBP28.5■■■□□ 2.15
LINC00511-205ENST00000578206 MAPK8IP2Q13387 824 aaPredicted RBP28.43■■■□□ 2.14
LINC00511-205ENST00000578206 NPM3O75607 178 aaKnown RBP28.28■■■□□ 2.12
LINC00511-205ENST00000578206 CNKSR2Q8WXI2 1034 aa28.15■■■□□ 2.1
LINC00511-205ENST00000578206 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
LINC00511-205ENST00000578206 CSRNP3Q8WYN3 585 aa28.04■■■□□ 2.08
LINC00511-205ENST00000578206 DMRT2Q9Y5R5 561 aa27.91■■■□□ 2.06
LINC00511-205ENST00000578206 RNF216Q9NWF9 866 aaPredicted RBP27.43■■□□□ 1.98
LINC00511-205ENST00000578206 ABCC9O60706 1549 aa27.38■■□□□ 1.97
LINC00511-205ENST00000578206 HOXD11P31277 338 aaPredicted RBP27.33■■□□□ 1.97
LINC00511-205ENST00000578206 DNAJC5BQ9UF47 199 aa27.31■■□□□ 1.96
LINC00511-205ENST00000578206 ZBTB22O15209 634 aa27.29■■□□□ 1.96
LINC00511-205ENST00000578206 POTEDQ86YR6 584 aa27.28■■□□□ 1.96
LINC00511-205ENST00000578206 FOXD4L1Q9NU39 408 aa27.06■■□□□ 1.92
LINC00511-205ENST00000578206 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
LINC00511-205ENST00000578206 DCAF8L1A6NGE4 600 aa26.75■■□□□ 1.87
LINC00511-205ENST00000578206 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
LINC00511-205ENST00000578206 NACADO15069 1562 aa26.48■■□□□ 1.83
LINC00511-205ENST00000578206 RB1CC1Q8TDY2 1594 aa26.44■■□□□ 1.82
LINC00511-205ENST00000578206 SLC4A2P04920 1241 aa26.41■■□□□ 1.82
LINC00511-205ENST00000578206 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.82
LINC00511-205ENST00000578206 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
LINC00511-205ENST00000578206 MYCNP04198 464 aaPredicted RBP26.16■■□□□ 1.78
LINC00511-205ENST00000578206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.07■■□□□ 1.76
LINC00511-205ENST00000578206 ATXN8OSP0DMR3 200 aa26.05■■□□□ 1.76
LINC00511-205ENST00000578206 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
LINC00511-205ENST00000578206 U3KPZ7 1027 aaPredicted RBP25.67■■□□□ 1.7
LINC00511-205ENST00000578206 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
LINC00511-205ENST00000578206 RNF39Q9H2S5 420 aa25.65■■□□□ 1.7
LINC00511-205ENST00000578206 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
LINC00511-205ENST00000578206 BICRAQ9NZM4 1560 aa25.51■■□□□ 1.67
LINC00511-205ENST00000578206 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.49■■□□□ 1.67
LINC00511-205ENST00000578206 HNRNPUL2Q1KMD3 747 aaKnown RBP25.49■■□□□ 1.67
LINC00511-205ENST00000578206 SAMD1Q6SPF0 538 aaPredicted RBP25.43■■□□□ 1.66
LINC00511-205ENST00000578206 SHROOM4Q9ULL8 1493 aa25.38■■□□□ 1.65
LINC00511-205ENST00000578206 FKBP8Q14318 412 aa25.33■■□□□ 1.65
LINC00511-205ENST00000578206 C1QBPQ07021 282 aaKnown RBP25.3■■□□□ 1.64
LINC00511-205ENST00000578206 ATF5Q9Y2D1 282 aaPredicted RBP25.29■■□□□ 1.64
LINC00511-205ENST00000578206 AMER1Q5JTC6 1135 aaPredicted RBP25.02■■□□□ 1.6
LINC00511-205ENST00000578206 APLP2Q06481 763 aa25■■□□□ 1.59
LINC00511-205ENST00000578206 CACNB1Q02641 598 aaPredicted RBP24.99■■□□□ 1.59
LINC00511-205ENST00000578206 SPINK5Q9NQ38 1064 aaPredicted RBP24.99■■□□□ 1.59
LINC00511-205ENST00000578206 RTN4Q9NQC3 1192 aaKnown RBP24.9■■□□□ 1.58
LINC00511-205ENST00000578206 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
LINC00511-205ENST00000578206 CAPN15O75808 1086 aa24.85■■□□□ 1.57
LINC00511-205ENST00000578206 ZNF219Q9P2Y4 722 aaPredicted RBP24.84■■□□□ 1.57
LINC00511-205ENST00000578206 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
LINC00511-205ENST00000578206 CECR2Q9BXF3 1484 aa24.75■■□□□ 1.55
LINC00511-205ENST00000578206 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
LINC00511-205ENST00000578206 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
LINC00511-205ENST00000578206 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
LINC00511-205ENST00000578206 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
LINC00511-205ENST00000578206 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
LINC00511-205ENST00000578206 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
LINC00511-205ENST00000578206 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
LINC00511-205ENST00000578206 DSG3P32926 999 aa24.43■■□□□ 1.5
LINC00511-205ENST00000578206 ABCB7O75027 752 aa24.41■■□□□ 1.5
LINC00511-205ENST00000578206 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
LINC00511-205ENST00000578206 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
LINC00511-205ENST00000578206 POLA2Q14181 598 aa24.34■■□□□ 1.49
LINC00511-205ENST00000578206 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
LINC00511-205ENST00000578206 SPDYE4A6NLX3 237 aa24.3■■□□□ 1.48
LINC00511-205ENST00000578206 SLC24A1O60721 1099 aa24.29■■□□□ 1.48
LINC00511-205ENST00000578206 FBLN2P98095 1184 aa24.29■■□□□ 1.48
LINC00511-205ENST00000578206 HMGXB3Q12766 1538 aa24.26■■□□□ 1.47
LINC00511-205ENST00000578206 MKRN4PQ13434 485 aaPredicted RBP24.26■■□□□ 1.47
LINC00511-205ENST00000578206 FBXO3Q9UK99 471 aa24.21■■□□□ 1.47
LINC00511-205ENST00000578206 WIZO95785 1651 aa24.21■■□□□ 1.47
LINC00511-205ENST00000578206 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
LINC00511-205ENST00000578206 PROM2Q8N271 834 aa24■■□□□ 1.43
LINC00511-205ENST00000578206 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
LINC00511-205ENST00000578206 ZBTB12Q9Y330 459 aaPredicted RBP23.94■■□□□ 1.42
LINC00511-205ENST00000578206 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
LINC00511-205ENST00000578206 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
LINC00511-205ENST00000578206 VASPP50552 380 aaPredicted RBP23.79■■□□□ 1.4
LINC00511-205ENST00000578206 LAMC3Q9Y6N6 1575 aa23.73■■□□□ 1.39
LINC00511-205ENST00000578206 NESP48681 1621 aa23.71■■□□□ 1.39
LINC00511-205ENST00000578206 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
LINC00511-205ENST00000578206 ERCC6Q03468 1493 aa23.66■■□□□ 1.38
LINC00511-205ENST00000578206 CFTRP13569 1480 aa23.65■■□□□ 1.38
LINC00511-205ENST00000578206 IFNLR1Q8IU57 520 aaPredicted RBP23.51■■□□□ 1.35
LINC00511-205ENST00000578206 OSCARQ8IYS5 282 aa23.51■■□□□ 1.35
LINC00511-205ENST00000578206 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
LINC00511-205ENST00000578206 ZNF692Q9BU19 519 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms