Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.73■■■□□ 2.19
SMG8Q8ND04 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
SMG8Q8ND04 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.72■■■□□ 2.19
SMG8Q8ND04 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SMG8Q8ND04 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.71■■■□□ 2.19
SMG8Q8ND04 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SMG8Q8ND04 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SMG8Q8ND04 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
SMG8Q8ND04 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.69■■■□□ 2.18
SMG8Q8ND04 HLA-V-202ENST00000446817 847 ntBASIC28.69■■■□□ 2.18
SMG8Q8ND04 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
SMG8Q8ND04 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
SMG8Q8ND04 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
SMG8Q8ND04 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMG8Q8ND04 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.67■■■□□ 2.18
SMG8Q8ND04 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.66■■■□□ 2.18
SMG8Q8ND04 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMG8Q8ND04 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
SMG8Q8ND04 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.65■■■□□ 2.18
SMG8Q8ND04 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMG8Q8ND04 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMG8Q8ND04 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMG8Q8ND04 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.63■■■□□ 2.17
SMG8Q8ND04 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
SMG8Q8ND04 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMG8Q8ND04 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMG8Q8ND04 AC010864.1-201ENST00000609407 1511 ntBASIC28.6■■■□□ 2.17
SMG8Q8ND04 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SMG8Q8ND04 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.59■■■□□ 2.17
SMG8Q8ND04 LINC01971-201ENST00000617888 1048 ntBASIC28.59■■■□□ 2.17
SMG8Q8ND04 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SMG8Q8ND04 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SMG8Q8ND04 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.58■■■□□ 2.17
SMG8Q8ND04 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.58■■■□□ 2.16
SMG8Q8ND04 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
SMG8Q8ND04 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.57■■■□□ 2.16
SMG8Q8ND04 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.57■■■□□ 2.16
SMG8Q8ND04 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.57■■■□□ 2.16
SMG8Q8ND04 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SMG8Q8ND04 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SMG8Q8ND04 DUX4L11-201ENST00000611504 1267 ntBASIC28.56■■■□□ 2.16
SMG8Q8ND04 DUX4L12-201ENST00000614593 1267 ntBASIC28.56■■■□□ 2.16
SMG8Q8ND04 DUX4L14-201ENST00000621227 1267 ntBASIC28.56■■■□□ 2.16
SMG8Q8ND04 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
SMG8Q8ND04 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SMG8Q8ND04 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.55■■■□□ 2.16
SMG8Q8ND04 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SMG8Q8ND04 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.53■■■□□ 2.16
SMG8Q8ND04 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.53■■■□□ 2.16
SMG8Q8ND04 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SMG8Q8ND04 MIR3648-2-201ENST00000581792 180 ntBASIC28.51■■■□□ 2.15
SMG8Q8ND04 MIR3648-1-201ENST00000615959 180 ntBASIC28.51■■■□□ 2.15
SMG8Q8ND04 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.5■■■□□ 2.15
SMG8Q8ND04 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
SMG8Q8ND04 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.49■■■□□ 2.15
SMG8Q8ND04 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SMG8Q8ND04 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.49■■■□□ 2.15
SMG8Q8ND04 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SMG8Q8ND04 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.48■■■□□ 2.15
SMG8Q8ND04 AC016575.1-201ENST00000607026 382 ntBASIC28.48■■■□□ 2.15
SMG8Q8ND04 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
SMG8Q8ND04 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
SMG8Q8ND04 CR559946.2-201ENST00000623684 991 ntBASIC28.47■■■□□ 2.15
SMG8Q8ND04 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SMG8Q8ND04 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.46■■■□□ 2.15
SMG8Q8ND04 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
SMG8Q8ND04 MIR639-201ENST00000384974 98 ntBASIC28.45■■■□□ 2.14
SMG8Q8ND04 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.45■■■□□ 2.14
SMG8Q8ND04 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SMG8Q8ND04 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SMG8Q8ND04 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.43■■■□□ 2.14
SMG8Q8ND04 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SMG8Q8ND04 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SMG8Q8ND04 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
SMG8Q8ND04 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.42■■■□□ 2.14
SMG8Q8ND04 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SMG8Q8ND04 AL135925.1-201ENST00000605920 1701 ntBASIC28.41■■■□□ 2.14
SMG8Q8ND04 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SMG8Q8ND04 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SMG8Q8ND04 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.41■■■□□ 2.14
SMG8Q8ND04 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SMG8Q8ND04 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SMG8Q8ND04 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SMG8Q8ND04 MIR4449-201ENST00000578365 66 ntBASIC28.39■■■□□ 2.14
SMG8Q8ND04 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.39■■■□□ 2.13
SMG8Q8ND04 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.38■■■□□ 2.13
SMG8Q8ND04 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SMG8Q8ND04 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SMG8Q8ND04 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SMG8Q8ND04 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SMG8Q8ND04 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L13-201ENST00000554103 1267 ntBASIC28.37■■■□□ 2.13
SMG8Q8ND04 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L15-201ENST00000611059 1267 ntBASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L23-201ENST00000615195 1269 ntBASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L24-201ENST00000617576 1269 ntBASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L22-201ENST00000618238 1269 ntBASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L20-201ENST00000619712 1269 ntBASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L21-201ENST00000622058 1269 ntBASIC28.37■■■□□ 2.13
SMG8Q8ND04 DUX4L10-201ENST00000622460 1267 ntBASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms