Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CPNE8Q86YQ8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CPNE8Q86YQ8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.63■■■□□ 2.01
CPNE8Q86YQ8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
CPNE8Q86YQ8 AC010864.1-201ENST00000609407 1511 ntBASIC27.62■■■□□ 2.01
CPNE8Q86YQ8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
CPNE8Q86YQ8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CPNE8Q86YQ8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
CPNE8Q86YQ8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.61■■■□□ 2.01
CPNE8Q86YQ8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CPNE8Q86YQ8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.59■■■□□ 2.01
CPNE8Q86YQ8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CPNE8Q86YQ8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CPNE8Q86YQ8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CPNE8Q86YQ8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CPNE8Q86YQ8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.58■■■□□ 2.01
CPNE8Q86YQ8 AL139393.2-201ENST00000608721 2025 ntBASIC27.58■■■□□ 2.01
CPNE8Q86YQ8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CPNE8Q86YQ8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
CPNE8Q86YQ8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.57■■■□□ 2
CPNE8Q86YQ8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.57■■■□□ 2
CPNE8Q86YQ8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
CPNE8Q86YQ8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.56■■■□□ 2
CPNE8Q86YQ8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CPNE8Q86YQ8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CPNE8Q86YQ8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.55■■■□□ 2
CPNE8Q86YQ8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.55■■■□□ 2
CPNE8Q86YQ8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CPNE8Q86YQ8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CPNE8Q86YQ8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.54■■■□□ 2
CPNE8Q86YQ8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.54■■■□□ 2
CPNE8Q86YQ8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CPNE8Q86YQ8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CPNE8Q86YQ8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
CPNE8Q86YQ8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CPNE8Q86YQ8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CPNE8Q86YQ8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CPNE8Q86YQ8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.52■■■□□ 2
CPNE8Q86YQ8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CPNE8Q86YQ8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CPNE8Q86YQ8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.51■■□□□ 1.99
CPNE8Q86YQ8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
CPNE8Q86YQ8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.51■■□□□ 1.99
CPNE8Q86YQ8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CPNE8Q86YQ8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CPNE8Q86YQ8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CPNE8Q86YQ8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
CPNE8Q86YQ8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CPNE8Q86YQ8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CPNE8Q86YQ8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
CPNE8Q86YQ8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
CPNE8Q86YQ8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CPNE8Q86YQ8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.47■■□□□ 1.99
CPNE8Q86YQ8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CPNE8Q86YQ8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CPNE8Q86YQ8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
CPNE8Q86YQ8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CPNE8Q86YQ8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CPNE8Q86YQ8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CPNE8Q86YQ8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CPNE8Q86YQ8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CPNE8Q86YQ8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.43■■□□□ 1.98
CPNE8Q86YQ8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPNE8Q86YQ8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CPNE8Q86YQ8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPNE8Q86YQ8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPNE8Q86YQ8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPNE8Q86YQ8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPNE8Q86YQ8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.41■■□□□ 1.98
CPNE8Q86YQ8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
CPNE8Q86YQ8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPNE8Q86YQ8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CPNE8Q86YQ8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CPNE8Q86YQ8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
CPNE8Q86YQ8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CPNE8Q86YQ8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CPNE8Q86YQ8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.38■■□□□ 1.97
CPNE8Q86YQ8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPNE8Q86YQ8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CPNE8Q86YQ8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.37■■□□□ 1.97
CPNE8Q86YQ8 SUZ12P1-203ENST00000578195 985 ntBASIC27.37■■□□□ 1.97
CPNE8Q86YQ8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CPNE8Q86YQ8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPNE8Q86YQ8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPNE8Q86YQ8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CPNE8Q86YQ8 DRD5P2-201ENST00000421395 2012 ntBASIC27.36■■□□□ 1.97
CPNE8Q86YQ8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CPNE8Q86YQ8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CPNE8Q86YQ8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.35■■□□□ 1.97
CPNE8Q86YQ8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CPNE8Q86YQ8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
CPNE8Q86YQ8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
CPNE8Q86YQ8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CPNE8Q86YQ8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CPNE8Q86YQ8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CPNE8Q86YQ8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.32■■□□□ 1.96
CPNE8Q86YQ8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CPNE8Q86YQ8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.32■■□□□ 1.96
CPNE8Q86YQ8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CPNE8Q86YQ8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms