Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 YML089CYML089C 369 nt8.53□□□□□ -1.04
TY1A-MR1Q04215 ARC35YNR035C 1029 nt8.53□□□□□ -1.04
TY1A-MR1Q04215 YGL114WYGL114W 2178 nt8.52□□□□□ -1.04
TY1A-MR1Q04215 PEX22YAL055W 543 nt8.52□□□□□ -1.05
TY1A-MR1Q04215 DSE3YOR264W 1293 nt8.52□□□□□ -1.05
TY1A-MR1Q04215 YBR292CYBR292C 372 nt8.52□□□□□ -1.05
TY1A-MR1Q04215 RAD17YOR368W 1206 nt8.51□□□□□ -1.05
TY1A-MR1Q04215 RCE1YMR274C 948 nt8.5□□□□□ -1.05
TY1A-MR1Q04215 CWC25YNL245C 540 nt8.5□□□□□ -1.05
TY1A-MR1Q04215 YIF1YNL263C 945 nt8.5□□□□□ -1.05
TY1A-MR1Q04215 RRS1YOR294W 612 nt8.5□□□□□ -1.05
TY1A-MR1Q04215 CTK2YJL006C 972 nt8.49□□□□□ -1.05
TY1A-MR1Q04215 YKR104WYKR104W 921 nt8.49□□□□□ -1.05
TY1A-MR1Q04215 RSF1YMR030W 1131 nt8.49□□□□□ -1.05
TY1A-MR1Q04215 VAM3YOR106W 852 nt8.49□□□□□ -1.05
TY1A-MR1Q04215 ILV3YJR016C 1758 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 HMRA1YCR097W 381 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 KRE28YDR532C 1158 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 YEL050W-AYEL050W-A 192 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 SHY1YGR112W 1170 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 YHR022CYHR022C 771 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 DAL2YIR029W 1032 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 PAU7YAR020C 168 nt8.48□□□□□ -1.05
TY1A-MR1Q04215 SVF1YDR346C 1446 nt8.47□□□□□ -1.05
TY1A-MR1Q04215 SSN3YPL042C 1668 nt8.47□□□□□ -1.05
TY1A-MR1Q04215 RTG3YBL103C 1461 nt8.47□□□□□ -1.05
TY1A-MR1Q04215 SFA1YDL168W 1161 nt8.47□□□□□ -1.05
TY1A-MR1Q04215 YHL019W-AYHL019W-A 594 nt8.47□□□□□ -1.05
TY1A-MR1Q04215 YDR010CYDR010C 333 nt8.46□□□□□ -1.06
TY1A-MR1Q04215 YLR198CYLR198C 360 nt8.46□□□□□ -1.06
TY1A-MR1Q04215 YNL024CYNL024C 741 nt8.46□□□□□ -1.06
TY1A-MR1Q04215 TOM6YOR045W 186 nt8.46□□□□□ -1.06
TY1A-MR1Q04215 RET2YFR051C 1641 nt8.45□□□□□ -1.06
TY1A-MR1Q04215 MRPL8YJL063C 717 nt8.45□□□□□ -1.06
TY1A-MR1Q04215 VPS20YMR077C 666 nt8.45□□□□□ -1.06
TY1A-MR1Q04215 MER1YNL210W 813 nt8.45□□□□□ -1.06
TY1A-MR1Q04215 TGS1YPL157W 948 nt8.45□□□□□ -1.06
TY1A-MR1Q04215 TFB4YPR056W 1017 nt8.45□□□□□ -1.06
TY1A-MR1Q04215 PRE2YPR103W 864 nt8.45□□□□□ -1.06
TY1A-MR1Q04215 ADO1YJR105W 1023 nt8.44□□□□□ -1.06
TY1A-MR1Q04215 YLR460CYLR460C 1131 nt8.44□□□□□ -1.06
TY1A-MR1Q04215 PRE6YOL038W 765 nt8.44□□□□□ -1.06
TY1A-MR1Q04215 DSC2YOL073C 969 nt8.44□□□□□ -1.06
TY1A-MR1Q04215 ALG7YBR243C 1347 nt8.44□□□□□ -1.06
TY1A-MR1Q04215 YFR018CYFR018C 1092 nt8.43□□□□□ -1.06
TY1A-MR1Q04215 MHO1YJR008W 1017 nt8.43□□□□□ -1.06
TY1A-MR1Q04215 SHB17YKR043C 816 nt8.43□□□□□ -1.06
TY1A-MR1Q04215 YOR325WYOR325W 474 nt8.43□□□□□ -1.06
TY1A-MR1Q04215 ISA2YPR067W 558 nt8.43□□□□□ -1.06
TY1A-MR1Q04215 YBL086CYBL086C 1401 nt8.43□□□□□ -1.06
TY1A-MR1Q04215 FSH1YHR049W 732 nt8.42□□□□□ -1.06
TY1A-MR1Q04215 YIL100C-AYIL100C-A 339 nt8.42□□□□□ -1.06
TY1A-MR1Q04215 PTC7YHR076W 1032 nt8.41□□□□□ -1.06
TY1A-MR1Q04215 JJJ3YJR097W 519 nt8.41□□□□□ -1.06
TY1A-MR1Q04215 TIF6YPR016C 738 nt8.41□□□□□ -1.06
TY1A-MR1Q04215 LIP1YMR298W 453 nt8.4□□□□□ -1.06
TY1A-MR1Q04215 YAP7YOL028C 738 nt8.4□□□□□ -1.06
TY1A-MR1Q04215 RRP15YPR143W 753 nt8.4□□□□□ -1.06
TY1A-MR1Q04215 YIL092WYIL092W 1902 nt8.39□□□□□ -1.07
TY1A-MR1Q04215 CBS1YDL069C 690 nt8.39□□□□□ -1.07
TY1A-MR1Q04215 SED1YDR077W 1017 nt8.39□□□□□ -1.07
TY1A-MR1Q04215 REX3YLR107W 1215 nt8.39□□□□□ -1.07
TY1A-MR1Q04215 YEA4YEL004W 1029 nt8.38□□□□□ -1.07
TY1A-MR1Q04215 RPF2YKR081C 1035 nt8.38□□□□□ -1.07
TY1A-MR1Q04215 YAR028WYAR028W 705 nt8.38□□□□□ -1.07
TY1A-MR1Q04215 YLR412C-AYLR412C-A 207 nt8.38□□□□□ -1.07
TY1A-MR1Q04215 OCA4YCR095C 1089 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 YER190C-AYER190C-A 576 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 YGR296C-AYGR296C-A 576 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 PEX2YJL210W 816 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 URA6YKL024C 615 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 YML133W-AYML133W-A 576 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 YNL339W-AYNL339W-A 576 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 OPI10YOL032W 741 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 YPL283W-AYPL283W-A 576 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 MGR3YMR115W 1506 nt8.37□□□□□ -1.07
TY1A-MR1Q04215 SFP1YLR403W 2052 nt8.36□□□□□ -1.07
TY1A-MR1Q04215 NPP1YCR026C 2229 nt8.36□□□□□ -1.07
TY1A-MR1Q04215 CWC15YDR163W 528 nt8.36□□□□□ -1.07
TY1A-MR1Q04215 YLR285C-AYLR285C-A 171 nt8.36□□□□□ -1.07
TY1A-MR1Q04215 SPC24YMR117C 642 nt8.36□□□□□ -1.07
TY1A-MR1Q04215 UBS1YBR165W 834 nt8.36□□□□□ -1.07
TY1A-MR1Q04215 COQ8YGL119W 1506 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 YKR015CYKR015C 1707 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 RRP17YDR412W 708 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 NAS6YGR232W 687 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 DBR1YKL149C 1218 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 RRP40YOL142W 723 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 FES1YBR101C 873 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 GID7YCL039W 2238 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 UFO1YML088W 2007 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 HIP1YGR191W 1812 nt8.35□□□□□ -1.07
TY1A-MR1Q04215 MRP20YDR405W 792 nt8.34□□□□□ -1.07
TY1A-MR1Q04215 MAE1YKL029C 2010 nt8.32□□□□□ -1.08
TY1A-MR1Q04215 PHO89YBR296C 1725 nt8.32□□□□□ -1.08
TY1A-MR1Q04215 CCT2YIL142W 1584 nt8.32□□□□□ -1.08
TY1A-MR1Q04215 LEU9YOR108W 1815 nt8.32□□□□□ -1.08
TY1A-MR1Q04215 CHA1YCL064C 1083 nt8.32□□□□□ -1.08
TY1A-MR1Q04215 HIS2YFR025C 1008 nt8.32□□□□□ -1.08
TY1A-MR1Q04215 YIL030W-AYIL030W-A 339 nt8.32□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms