Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 KES1YPL145C 1305 nt9□□□□□ -0.97
VPS9P54787 tS(GCU)LtS(GCU)L 80 nt8.99□□□□□ -0.97
VPS9P54787 POT1YIL160C 1254 nt8.99□□□□□ -0.97
VPS9P54787 HEL2YDR266C 1920 nt8.99□□□□□ -0.97
VPS9P54787 SPS100YHR139C 981 nt8.97□□□□□ -0.97
VPS9P54787 YMR262WYMR262W 942 nt8.97□□□□□ -0.97
VPS9P54787 ZAP1YJL056C 2643 nt8.97□□□□□ -0.97
VPS9P54787 YFR036W-AYFR036W-A 651 nt8.96□□□□□ -0.98
VPS9P54787 YJR114WYJR114W 393 nt8.96□□□□□ -0.98
VPS9P54787 ESS1YJR017C 513 nt8.95□□□□□ -0.98
VPS9P54787 RSC4YKR008W 1878 nt8.95□□□□□ -0.98
VPS9P54787 PAU5YFL020C 369 nt8.94□□□□□ -0.98
VPS9P54787 HIS2YFR025C 1008 nt8.94□□□□□ -0.98
VPS9P54787 UGP1YKL035W 1500 nt8.94□□□□□ -0.98
VPS9P54787 SGA1YIL099W 1650 nt8.94□□□□□ -0.98
VPS9P54787 GSF2YML048W 1212 nt8.93□□□□□ -0.98
VPS9P54787 GID8YMR135C 1368 nt8.92□□□□□ -0.98
VPS9P54787 SAC7YDR389W 1965 nt8.92□□□□□ -0.98
VPS9P54787 TVP23YDR084C 600 nt8.91□□□□□ -0.98
VPS9P54787 ILV2YMR108W 2064 nt8.9□□□□□ -0.98
VPS9P54787 ABZ2YMR289W 1125 nt8.9□□□□□ -0.98
VPS9P54787 DLD3YEL071W 1491 nt8.89□□□□□ -0.99
VPS9P54787 OPI3YJR073C 621 nt8.89□□□□□ -0.99
VPS9P54787 STP3YLR375W 1032 nt8.89□□□□□ -0.99
VPS9P54787 YNR064CYNR064C 873 nt8.89□□□□□ -0.99
VPS9P54787 PGC1YPL206C 966 nt8.89□□□□□ -0.99
VPS9P54787 TUB4YLR212C 1422 nt8.88□□□□□ -0.99
VPS9P54787 DTR1YBR180W 1719 nt8.88□□□□□ -0.99
VPS9P54787 APS2YJR058C 444 nt8.86□□□□□ -0.99
VPS9P54787 YDR306CYDR306C 1437 nt8.86□□□□□ -0.99
VPS9P54787 YKL133CYKL133C 1392 nt8.86□□□□□ -0.99
VPS9P54787 ITR2YOL103W 1830 nt8.85□□□□□ -0.99
VPS9P54787 MRS6YOR370C 1812 nt8.84□□□□□ -0.99
VPS9P54787 TIP1YBR067C 633 nt8.84□□□□□ -0.99
VPS9P54787 ENO2YHR174W 1314 nt8.83□□□□□ -1
VPS9P54787 NIF3YGL221C 867 nt8.83□□□□□ -1
VPS9P54787 ELO1YJL196C 933 nt8.83□□□□□ -1
VPS9P54787 YBR232CYBR232C 360 nt8.83□□□□□ -1
VPS9P54787 YHR219WYHR219W 1875 nt8.83□□□□□ -1
VPS9P54787 PAR32YDL173W 888 nt8.82□□□□□ -1
VPS9P54787 LSR1LSR1 1175 nt8.82□□□□□ -1
VPS9P54787 VMA11YPL234C 495 nt8.82□□□□□ -1
VPS9P54787 KRE1YNL322C 942 nt8.81□□□□□ -1
VPS9P54787 MAE1YKL029C 2010 nt8.81□□□□□ -1
VPS9P54787 KEL3YPL263C 1956 nt8.8□□□□□ -1
VPS9P54787 AMF1YOR378W 1548 nt8.8□□□□□ -1
VPS9P54787 RPD3YNL330C 1302 nt8.79□□□□□ -1
VPS9P54787 PCP1YGR101W 1041 nt8.78□□□□□ -1
VPS9P54787 SEN2YLR105C 1134 nt8.78□□□□□ -1
VPS9P54787 YMR265CYMR265C 1386 nt8.76□□□□□ -1.01
VPS9P54787 YMR209CYMR209C 1374 nt8.75□□□□□ -1.01
VPS9P54787 RPN14YGL004C 1254 nt8.75□□□□□ -1.01
VPS9P54787 SPE2YOL052C 1191 nt8.75□□□□□ -1.01
VPS9P54787 HAP5YOR358W 729 nt8.75□□□□□ -1.01
VPS9P54787 SSL2YIL143C 2532 nt8.75□□□□□ -1.01
VPS9P54787 TPC1YGR096W 945 nt8.74□□□□□ -1.01
VPS9P54787 SNX3YOR357C 489 nt8.74□□□□□ -1.01
VPS9P54787 snR31snR31 225 nt8.74□□□□□ -1.01
VPS9P54787 CWP2YKL096W-A 279 nt8.73□□□□□ -1.01
VPS9P54787 SUV3YPL029W 2214 nt8.73□□□□□ -1.01
VPS9P54787 TIM44YIL022W 1296 nt8.72□□□□□ -1.01
VPS9P54787 NAP1YKR048C 1254 nt8.72□□□□□ -1.01
VPS9P54787 SWT21YNL187W 1074 nt8.72□□□□□ -1.01
VPS9P54787 LEU2YCL018W 1095 nt8.72□□□□□ -1.01
VPS9P54787 RFC1YOR217W 2586 nt8.71□□□□□ -1.01
VPS9P54787 ACO2YJL200C 2370 nt8.71□□□□□ -1.01
VPS9P54787 NPP1YCR026C 2229 nt8.71□□□□□ -1.02
VPS9P54787 IGD1YFR017C 588 nt8.71□□□□□ -1.02
VPS9P54787 NAS2YIL007C 663 nt8.71□□□□□ -1.02
VPS9P54787 ODC1YPL134C 933 nt8.71□□□□□ -1.02
VPS9P54787 MET2YNL277W 1461 nt8.7□□□□□ -1.02
VPS9P54787 SFL1YOR140W 2301 nt8.7□□□□□ -1.02
VPS9P54787 YRF1-3YGR296W 5580 nt8.7□□□□□ -1.02
VPS9P54787 YRF1-6YNL339C 5580 nt8.7□□□□□ -1.02
VPS9P54787 YRF1-7YPL283C 5580 nt8.7□□□□□ -1.02
VPS9P54787 THP3YPR045C 1413 nt8.7□□□□□ -1.02
VPS9P54787 DMA2YNL116W 1569 nt8.69□□□□□ -1.02
VPS9P54787 MET1YKR069W 1782 nt8.69□□□□□ -1.02
VPS9P54787 YJL064WYJL064W 396 nt8.68□□□□□ -1.02
VPS9P54787 FSH2YMR222C 672 nt8.68□□□□□ -1.02
VPS9P54787 KRR1YCL059C 951 nt8.67□□□□□ -1.02
VPS9P54787 CRC1YOR100C 984 nt8.67□□□□□ -1.02
VPS9P54787 NAM8YHR086W 1572 nt8.66□□□□□ -1.02
VPS9P54787 PUS7YOR243C 2031 nt8.66□□□□□ -1.02
VPS9P54787 CDD1YLR245C 429 nt8.65□□□□□ -1.02
VPS9P54787 PAU19YMR325W 375 nt8.65□□□□□ -1.02
VPS9P54787 RPC31YNL151C 756 nt8.65□□□□□ -1.02
VPS9P54787 YHR218WYHR218W 1812 nt8.64□□□□□ -1.03
VPS9P54787 YKL053WYKL053W 375 nt8.64□□□□□ -1.03
VPS9P54787 Q0010Q0010 387 nt8.64□□□□□ -1.03
VPS9P54787 SFP1YLR403W 2052 nt8.63□□□□□ -1.03
VPS9P54787 MDM35YKL053C-A 261 nt8.63□□□□□ -1.03
VPS9P54787 YKR012CYKR012C 378 nt8.62□□□□□ -1.03
VPS9P54787 PSD1YNL169C 1503 nt8.62□□□□□ -1.03
VPS9P54787 GNP1YDR508C 1992 nt8.61□□□□□ -1.03
VPS9P54787 REX2YLR059C 810 nt8.61□□□□□ -1.03
VPS9P54787 CYT1YOR065W 930 nt8.61□□□□□ -1.03
VPS9P54787 RIM2YBR192W 1134 nt8.61□□□□□ -1.03
VPS9P54787 YIL177CYIL177C 5277 nt8.6□□□□□ -1.03
VPS9P54787 tA(AGC)DtA(AGC)D 73 nt8.6□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms