Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YHR218WYHR218W 1812 nt9.17□□□□□ -0.94
YNL040WP53960 RRT8YOL048C 1029 nt9.17□□□□□ -0.94
YNL040WP53960 SFP1YLR403W 2052 nt9.16□□□□□ -0.94
YNL040WP53960 CPD1YGR247W 720 nt9.16□□□□□ -0.94
YNL040WP53960 ENT4YLL038C 744 nt9.15□□□□□ -0.94
YNL040WP53960 LSR1LSR1 1175 nt9.15□□□□□ -0.94
YNL040WP53960 ADH7YCR105W 1086 nt9.14□□□□□ -0.95
YNL040WP53960 CTI6YPL181W 1521 nt9.14□□□□□ -0.95
YNL040WP53960 IML3YBR107C 738 nt9.13□□□□□ -0.95
YNL040WP53960 YFR036W-AYFR036W-A 651 nt9.12□□□□□ -0.95
YNL040WP53960 YLR046CYLR046C 813 nt9.12□□□□□ -0.95
YNL040WP53960 DLD3YEL071W 1491 nt9.11□□□□□ -0.95
YNL040WP53960 PAU15YIR041W 375 nt9.11□□□□□ -0.95
YNL040WP53960 TAF13YML098W 504 nt9.11□□□□□ -0.95
YNL040WP53960 SAC7YDR389W 1965 nt9.11□□□□□ -0.95
YNL040WP53960 HXT10YFL011W 1641 nt9.1□□□□□ -0.95
YNL040WP53960 ADE8YDR408C 645 nt9.1□□□□□ -0.95
YNL040WP53960 MDM35YKL053C-A 261 nt9.1□□□□□ -0.95
YNL040WP53960 MHF1YOL086W-A 273 nt9.1□□□□□ -0.95
YNL040WP53960 ITR2YOL103W 1830 nt9.08□□□□□ -0.96
YNL040WP53960 SPS100YHR139C 981 nt9.07□□□□□ -0.96
YNL040WP53960 YJR114WYJR114W 393 nt9.07□□□□□ -0.96
YNL040WP53960 POT1YIL160C 1254 nt9.05□□□□□ -0.96
YNL040WP53960 TPO4YOR273C 1980 nt9.04□□□□□ -0.96
YNL040WP53960 TVP23YDR084C 600 nt9.04□□□□□ -0.96
YNL040WP53960 OPI3YJR073C 621 nt9.04□□□□□ -0.96
YNL040WP53960 CWP2YKL096W-A 279 nt9.04□□□□□ -0.96
YNL040WP53960 YMR262WYMR262W 942 nt9.04□□□□□ -0.96
YNL040WP53960 HMG2YLR450W 3138 nt9.03□□□□□ -0.96
YNL040WP53960 RPD3YNL330C 1302 nt9.03□□□□□ -0.96
YNL040WP53960 TIM44YIL022W 1296 nt9.02□□□□□ -0.97
YNL040WP53960 YNR064CYNR064C 873 nt9□□□□□ -0.97
YNL040WP53960 PAU5YFL020C 369 nt8.98□□□□□ -0.97
YNL040WP53960 ESS1YJR017C 513 nt8.98□□□□□ -0.97
YNL040WP53960 ABZ2YMR289W 1125 nt8.98□□□□□ -0.97
YNL040WP53960 ELO1YJL196C 933 nt8.97□□□□□ -0.97
YNL040WP53960 GSF2YML048W 1212 nt8.97□□□□□ -0.97
YNL040WP53960 PGC1YPL206C 966 nt8.97□□□□□ -0.97
YNL040WP53960 TUB4YLR212C 1422 nt8.97□□□□□ -0.97
YNL040WP53960 NIF3YGL221C 867 nt8.96□□□□□ -0.98
YNL040WP53960 tS(GCU)LtS(GCU)L 80 nt8.96□□□□□ -0.98
YNL040WP53960 APS2YJR058C 444 nt8.96□□□□□ -0.98
YNL040WP53960 AGP3YFL055W 1677 nt8.96□□□□□ -0.98
YNL040WP53960 VMA11YPL234C 495 nt8.95□□□□□ -0.98
YNL040WP53960 TIP1YBR067C 633 nt8.95□□□□□ -0.98
YNL040WP53960 DPL1YDR294C 1770 nt8.94□□□□□ -0.98
YNL040WP53960 STP3YLR375W 1032 nt8.93□□□□□ -0.98
YNL040WP53960 KEL3YPL263C 1956 nt8.93□□□□□ -0.98
YNL040WP53960 RIM2YBR192W 1134 nt8.92□□□□□ -0.98
YNL040WP53960 RPC31YNL151C 756 nt8.91□□□□□ -0.98
YNL040WP53960 SUV3YPL029W 2214 nt8.9□□□□□ -0.98
YNL040WP53960 SNX3YOR357C 489 nt8.9□□□□□ -0.98
YNL040WP53960 ALD5YER073W 1563 nt8.9□□□□□ -0.99
YNL040WP53960 AMF1YOR378W 1548 nt8.9□□□□□ -0.99
YNL040WP53960 SFL1YOR140W 2301 nt8.89□□□□□ -0.99
YNL040WP53960 YMR265CYMR265C 1386 nt8.89□□□□□ -0.99
YNL040WP53960 ENO2YHR174W 1314 nt8.89□□□□□ -0.99
YNL040WP53960 PCP1YGR101W 1041 nt8.89□□□□□ -0.99
YNL040WP53960 YBR232CYBR232C 360 nt8.89□□□□□ -0.99
YNL040WP53960 HXK1YFR053C 1458 nt8.89□□□□□ -0.99
YNL040WP53960 SWT21YNL187W 1074 nt8.88□□□□□ -0.99
YNL040WP53960 HAP5YOR358W 729 nt8.88□□□□□ -0.99
YNL040WP53960 LEU4YNL104C 1860 nt8.87□□□□□ -0.99
YNL040WP53960 TPC1YGR096W 945 nt8.86□□□□□ -0.99
YNL040WP53960 NPP1YCR026C 2229 nt8.86□□□□□ -0.99
YNL040WP53960 NBA1YOL070C 1506 nt8.85□□□□□ -0.99
YNL040WP53960 MET1YKR069W 1782 nt8.84□□□□□ -0.99
YNL040WP53960 PAR32YDL173W 888 nt8.84□□□□□ -0.99
YNL040WP53960 RPN14YGL004C 1254 nt8.84□□□□□ -0.99
YNL040WP53960 NAS2YIL007C 663 nt8.84□□□□□ -0.99
YNL040WP53960 CRC1YOR100C 984 nt8.83□□□□□ -1
YNL040WP53960 snR31snR31 225 nt8.83□□□□□ -1
YNL040WP53960 CDD1YLR245C 429 nt8.82□□□□□ -1
YNL040WP53960 YOR072WYOR072W 315 nt8.82□□□□□ -1
YNL040WP53960 KRR1YCL059C 951 nt8.81□□□□□ -1
YNL040WP53960 KRE1YNL322C 942 nt8.81□□□□□ -1
YNL040WP53960 SPE2YOL052C 1191 nt8.81□□□□□ -1
YNL040WP53960 NPP2YEL016C 1482 nt8.81□□□□□ -1
YNL040WP53960 FET5YFL041W 1869 nt8.81□□□□□ -1
YNL040WP53960 IGD1YFR017C 588 nt8.8□□□□□ -1
YNL040WP53960 LEU2YCL018W 1095 nt8.8□□□□□ -1
YNL040WP53960 THP3YPR045C 1413 nt8.8□□□□□ -1
YNL040WP53960 YKL053WYKL053W 375 nt8.79□□□□□ -1
YNL040WP53960 SEN2YLR105C 1134 nt8.79□□□□□ -1
YNL040WP53960 PUP1YOR157C 786 nt8.79□□□□□ -1
YNL040WP53960 URA8YJR103W 1737 nt8.78□□□□□ -1
YNL040WP53960 NAM8YHR086W 1572 nt8.78□□□□□ -1
YNL040WP53960 MEX67YPL169C 1800 nt8.76□□□□□ -1.01
YNL040WP53960 INH1YDL181W 258 nt8.76□□□□□ -1.01
YNL040WP53960 FSH2YMR222C 672 nt8.76□□□□□ -1.01
YNL040WP53960 tD(GUC)BtD(GUC)B 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)DtD(GUC)D 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)G1tD(GUC)G1 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)G2tD(GUC)G2 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)I1tD(GUC)I1 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)I2tD(GUC)I2 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)J1tD(GUC)J1 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)J2tD(GUC)J2 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)J3tD(GUC)J3 72 nt8.74□□□□□ -1.01
YNL040WP53960 tD(GUC)J4tD(GUC)J4 72 nt8.74□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 120.9 ms