Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YHR145CYHR145C 357 nt9.25□□□□□ -0.93
TY1A-PR2P0CX60 YAT1YAR035W 2064 nt9.24□□□□□ -0.93
TY1A-PR2P0CX60 YDL121CYDL121C 450 nt9.24□□□□□ -0.93
TY1A-PR2P0CX60 YLR154C-GYLR154C-G 150 nt9.24□□□□□ -0.93
TY1A-PR2P0CX60 CDA2YLR308W 939 nt9.24□□□□□ -0.93
TY1A-PR2P0CX60 YBL029C-AYBL029C-A 285 nt9.24□□□□□ -0.93
TY1A-PR2P0CX60 YET2YMR040W 483 nt9.24□□□□□ -0.93
TY1A-PR2P0CX60 YER138W-AYER138W-A 105 nt9.23□□□□□ -0.93
TY1A-PR2P0CX60 ARG3YJL088W 1017 nt9.23□□□□□ -0.93
TY1A-PR2P0CX60 FIP1YJR093C 984 nt9.23□□□□□ -0.93
TY1A-PR2P0CX60 YLR118CYLR118C 684 nt9.23□□□□□ -0.93
TY1A-PR2P0CX60 YMR244WYMR244W 1068 nt9.23□□□□□ -0.93
TY1A-PR2P0CX60 YBL107W-AYBL107W-A 105 nt9.23□□□□□ -0.93
TY1A-PR2P0CX60 YJR115WYJR115W 510 nt9.22□□□□□ -0.93
TY1A-PR2P0CX60 YMR144WYMR144W 1029 nt9.22□□□□□ -0.93
TY1A-PR2P0CX60 YDR220CYDR220C 294 nt9.21□□□□□ -0.94
TY1A-PR2P0CX60 OKP1YGR179C 1221 nt9.21□□□□□ -0.94
TY1A-PR2P0CX60 TDH1YJL052W 999 nt9.21□□□□□ -0.94
TY1A-PR2P0CX60 FMT1YBL013W 1206 nt9.21□□□□□ -0.94
TY1A-PR2P0CX60 ESC2YDR363W 1371 nt9.21□□□□□ -0.94
TY1A-PR2P0CX60 SAS4YDR181C 1446 nt9.21□□□□□ -0.94
TY1A-PR2P0CX60 ERV29YGR284C 933 nt9.2□□□□□ -0.94
TY1A-PR2P0CX60 ATP12YJL180C 978 nt9.2□□□□□ -0.94
TY1A-PR2P0CX60 TAP42YMR028W 1101 nt9.2□□□□□ -0.94
TY1A-PR2P0CX60 BAG7YOR134W 1230 nt9.2□□□□□ -0.94
TY1A-PR2P0CX60 MIC10YCL057C-A 294 nt9.2□□□□□ -0.94
TY1A-PR2P0CX60 NMT1YLR195C 1368 nt9.2□□□□□ -0.94
TY1A-PR2P0CX60 YMR209CYMR209C 1374 nt9.2□□□□□ -0.94
TY1A-PR2P0CX60 GCV1YDR019C 1203 nt9.19□□□□□ -0.94
TY1A-PR2P0CX60 TCA17YEL048C 459 nt9.19□□□□□ -0.94
TY1A-PR2P0CX60 CCE1YKL011C 1062 nt9.19□□□□□ -0.94
TY1A-PR2P0CX60 CRR1YLR213C 1269 nt9.19□□□□□ -0.94
TY1A-PR2P0CX60 TAF11YML015C 1041 nt9.19□□□□□ -0.94
TY1A-PR2P0CX60 YMR181CYMR181C 465 nt9.19□□□□□ -0.94
TY1A-PR2P0CX60 KAR1YNL188W 1302 nt9.19□□□□□ -0.94
TY1A-PR2P0CX60 YDR161WYDR161W 1164 nt9.18□□□□□ -0.94
TY1A-PR2P0CX60 FMP52YER004W 696 nt9.18□□□□□ -0.94
TY1A-PR2P0CX60 VHS2YIL135C 1311 nt9.18□□□□□ -0.94
TY1A-PR2P0CX60 CTR3YLR411W 726 nt9.18□□□□□ -0.94
TY1A-PR2P0CX60 YNR048WYNR048W 1182 nt9.18□□□□□ -0.94
TY1A-PR2P0CX60 PPH22YDL188C 1134 nt9.17□□□□□ -0.94
TY1A-PR2P0CX60 BI2Q0110 1272 nt9.17□□□□□ -0.94
TY1A-PR2P0CX60 ERJ5YFR041C 888 nt9.17□□□□□ -0.94
TY1A-PR2P0CX60 YFR045WYFR045W 930 nt9.17□□□□□ -0.94
TY1A-PR2P0CX60 MMS2YGL087C 414 nt9.17□□□□□ -0.94
TY1A-PR2P0CX60 RPN8YOR261C 1017 nt9.17□□□□□ -0.94
TY1A-PR2P0CX60 RAM1YDL090C 1296 nt9.16□□□□□ -0.94
TY1A-PR2P0CX60 SHU1YHL006C 453 nt9.16□□□□□ -0.94
TY1A-PR2P0CX60 ISY1YJR050W 708 nt9.16□□□□□ -0.94
TY1A-PR2P0CX60 GLC8YMR311C 690 nt9.16□□□□□ -0.94
TY1A-PR2P0CX60 COG5YNL051W 1212 nt9.16□□□□□ -0.94
TY1A-PR2P0CX60 DML1YMR211W 1428 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 YLH47YPR125W 1365 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 YAP6YDR259C 1152 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 TVP38YKR088C 1014 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 ADH2YMR303C 1047 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 YNL226WYNL226W 411 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 RTC4YNL254C 1206 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 PTC4YBR125C 1182 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 IPI3YNL182C 1668 nt9.15□□□□□ -0.94
TY1A-PR2P0CX60 COG7YGL005C 840 nt9.14□□□□□ -0.95
TY1A-PR2P0CX60 YIP3YNL044W 531 nt9.14□□□□□ -0.95
TY1A-PR2P0CX60 YOL150CYOL150C 312 nt9.14□□□□□ -0.95
TY1A-PR2P0CX60 YBR138CYBR138C 1575 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 YLR202CYLR202C 327 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 ERF2YLR246W 1080 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 YLR407WYLR407W 687 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 YNL171CYNL171C 369 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 HEM15YOR176W 1182 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 YPR027CYPR027C 834 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 TIF5YPR041W 1218 nt9.13□□□□□ -0.95
TY1A-PR2P0CX60 RAX1YOR301W 1308 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 snR56snR56 88 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 snR57snR57 88 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 RPN9YDR427W 1182 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 DDI1YER143W 1287 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 MIR1YJR077C 936 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 SSU72YNL222W 621 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 YOL024WYOL024W 519 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 YBR089WYBR089W 600 nt9.12□□□□□ -0.95
TY1A-PR2P0CX60 HEL2YDR266C 1920 nt9.11□□□□□ -0.95
TY1A-PR2P0CX60 RBG2YGR173W 1107 nt9.11□□□□□ -0.95
TY1A-PR2P0CX60 BUD31YCR063W 474 nt9.1□□□□□ -0.95
TY1A-PR2P0CX60 WSC2YNL283C 1512 nt9.1□□□□□ -0.95
TY1A-PR2P0CX60 RRT6YGL146C 936 nt9.09□□□□□ -0.95
TY1A-PR2P0CX60 IRC24YIR036C 792 nt9.09□□□□□ -0.95
TY1A-PR2P0CX60 AGP1YCL025C 1902 nt9.08□□□□□ -0.96
TY1A-PR2P0CX60 YFL019CYFL019C 354 nt9.08□□□□□ -0.96
TY1A-PR2P0CX60 UFD1YGR048W 1086 nt9.08□□□□□ -0.96
TY1A-PR2P0CX60 ATF2YGR177C 1608 nt9.08□□□□□ -0.96
TY1A-PR2P0CX60 ARO9YHR137W 1542 nt9.07□□□□□ -0.96
TY1A-PR2P0CX60 YCR025CYCR025C 411 nt9.07□□□□□ -0.96
TY1A-PR2P0CX60 YGR259CYGR259C 441 nt9.07□□□□□ -0.96
TY1A-PR2P0CX60 SNF6YHL025W 999 nt9.07□□□□□ -0.96
TY1A-PR2P0CX60 SUI2YJR007W 915 nt9.07□□□□□ -0.96
TY1A-PR2P0CX60 MTG1YMR097C 1104 nt9.07□□□□□ -0.96
TY1A-PR2P0CX60 SNG1YGR197C 1644 nt9.06□□□□□ -0.96
TY1A-PR2P0CX60 HEM12YDR047W 1089 nt9.06□□□□□ -0.96
TY1A-PR2P0CX60 CWC15YDR163W 528 nt9.06□□□□□ -0.96
TY1A-PR2P0CX60 RTN1YDR233C 888 nt9.06□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms