Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 SLC7A5P1-201ENST00000568957 537 ntBASIC21.26■□□□□ 0.99
RFX6Q8HWS3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 AL121603.2-201ENST00000557373 2117 ntBASIC21.26■□□□□ 0.99
RFX6Q8HWS3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RFX6Q8HWS3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 AC091799.1-201ENST00000422823 811 ntBASIC21.25■□□□□ 0.99
RFX6Q8HWS3 AC097381.1-201ENST00000429019 1296 ntBASIC21.25■□□□□ 0.99
RFX6Q8HWS3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 AC087623.3-201ENST00000607047 1098 ntBASIC21.25■□□□□ 0.99
RFX6Q8HWS3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.25■□□□□ 0.99
RFX6Q8HWS3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 AC243732.1-201ENST00000612648 864 ntBASIC21.24■□□□□ 0.99
RFX6Q8HWS3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RFX6Q8HWS3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFX6Q8HWS3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 MIR6821-201ENST00000617625 74 ntBASIC21.22■□□□□ 0.99
RFX6Q8HWS3 MYCNOS-205ENST00000641950 531 ntBASIC21.22■□□□□ 0.99
RFX6Q8HWS3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFX6Q8HWS3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms