Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YPR016W-AYPR016W-A 261 nt3.28□□□□□ -1.88
TY4A-JP47023 BAS1YKR099W 2436 nt3.28□□□□□ -1.89
TY4A-JP47023 ECM21YBL101C 3354 nt3.27□□□□□ -1.89
TY4A-JP47023 YJR003CYJR003C 1560 nt3.27□□□□□ -1.89
TY4A-JP47023 YHR139C-AYHR139C-A 312 nt3.27□□□□□ -1.89
TY4A-JP47023 AIM32YML050W 936 nt3.27□□□□□ -1.89
TY4A-JP47023 YMR031W-AYMR031W-A 327 nt3.27□□□□□ -1.89
TY4A-JP47023 YOR146WYOR146W 306 nt3.27□□□□□ -1.89
TY4A-JP47023 STU2YLR045C 2667 nt3.27□□□□□ -1.89
TY4A-JP47023 CAF120YNL278W 3183 nt3.27□□□□□ -1.89
TY4A-JP47023 BUD4YJR092W 4344 nt3.27□□□□□ -1.89
TY4A-JP47023 YNL034WYNL034W 1839 nt3.26□□□□□ -1.89
TY4A-JP47023 ABM1YJR108W 372 nt3.26□□□□□ -1.89
TY4A-JP47023 RPL8BYLL045C 771 nt3.26□□□□□ -1.89
TY4A-JP47023 VTI1YMR197C 654 nt3.26□□□□□ -1.89
TY4A-JP47023 TRM2YKR056W 1920 nt3.26□□□□□ -1.89
TY4A-JP47023 GCV2YMR189W 3105 nt3.26□□□□□ -1.89
TY4A-JP47023 RLF2YPR018W 1821 nt3.26□□□□□ -1.89
TY4A-JP47023 YER189WYER189W 369 nt3.25□□□□□ -1.89
TY4A-JP47023 YHR052W-AYHR052W-A 195 nt3.25□□□□□ -1.89
TY4A-JP47023 YHR054W-AYHR054W-A 195 nt3.25□□□□□ -1.89
TY4A-JP47023 tT(UGU)Q1tT(UGU)Q1 76 nt3.25□□□□□ -1.89
TY4A-JP47023 YIL058WYIL058W 285 nt3.25□□□□□ -1.89
TY4A-JP47023 MAM33YIL070C 801 nt3.25□□□□□ -1.89
TY4A-JP47023 RPL19BYBL027W 570 nt3.25□□□□□ -1.89
TY4A-JP47023 COQ10YOL008W 624 nt3.25□□□□□ -1.89
TY4A-JP47023 BIL1YOR304C-A 231 nt3.25□□□□□ -1.89
TY4A-JP47023 ATG26YLR189C 3597 nt3.25□□□□□ -1.89
TY4A-JP47023 MSS11YMR164C 2277 nt3.24□□□□□ -1.89
TY4A-JP47023 SPC72YAL047C 1869 nt3.24□□□□□ -1.89
TY4A-JP47023 YMR31YFR049W 372 nt3.24□□□□□ -1.89
TY4A-JP47023 TIM8YJR135W-A 264 nt3.24□□□□□ -1.89
TY4A-JP47023 SUL1YBR294W 2580 nt3.24□□□□□ -1.89
TY4A-JP47023 YJR098CYJR098C 1971 nt3.23□□□□□ -1.89
TY4A-JP47023 AKR1YDR264C 2295 nt3.23□□□□□ -1.89
TY4A-JP47023 YTA7YGR270W 4140 nt3.23□□□□□ -1.89
TY4A-JP47023 SKT5YBL061C 2091 nt3.23□□□□□ -1.89
TY4A-JP47023 STE6YKL209C 3873 nt3.23□□□□□ -1.89
TY4A-JP47023 UBC7YMR022W 498 nt3.23□□□□□ -1.89
TY4A-JP47023 YMR122W-AYMR122W-A 255 nt3.23□□□□□ -1.89
TY4A-JP47023 MRPL33YMR286W 261 nt3.23□□□□□ -1.89
TY4A-JP47023 YOR105WYOR105W 327 nt3.23□□□□□ -1.89
TY4A-JP47023 YPL225WYPL225W 441 nt3.23□□□□□ -1.89
TY4A-JP47023 IKI3YLR384C 4050 nt3.23□□□□□ -1.89
TY4A-JP47023 APC2YLR127C 2562 nt3.23□□□□□ -1.89
TY4A-JP47023 YJL016WYJL016W 1686 nt3.23□□□□□ -1.89
TY4A-JP47023 YDL152WYDL152W 366 nt3.22□□□□□ -1.89
TY4A-JP47023 LCL2YLR104W 396 nt3.22□□□□□ -1.89
TY4A-JP47023 YGR027W-BYGR027W-B 5268 nt3.22□□□□□ -1.89
TY4A-JP47023 YLR227W-BYLR227W-B 5268 nt3.22□□□□□ -1.89
TY4A-JP47023 YPR158C-DYPR158C-D 5268 nt3.22□□□□□ -1.89
TY4A-JP47023 BNA4YBL098W 1383 nt3.22□□□□□ -1.89
TY4A-JP47023 TOM1YDR457W 9807 nt3.22□□□□□ -1.89
TY4A-JP47023 ISW1YBR245C 3390 nt3.21□□□□□ -1.9
TY4A-JP47023 YHL037CYHL037C 402 nt3.21□□□□□ -1.9
TY4A-JP47023 SPO14YKR031C 5052 nt3.21□□□□□ -1.9
TY4A-JP47023 ARO1YDR127W 4767 nt3.2□□□□□ -1.9
TY4A-JP47023 YCR022CYCR022C 345 nt3.2□□□□□ -1.9
TY4A-JP47023 URM1YIL008W 300 nt3.2□□□□□ -1.9
TY4A-JP47023 SWM2YNR004W 441 nt3.2□□□□□ -1.9
TY4A-JP47023 FMP23YBR047W 528 nt3.2□□□□□ -1.9
TY4A-JP47023 SWT1YOR166C 1377 nt3.2□□□□□ -1.9
TY4A-JP47023 DYN1YKR054C 12279 nt3.19□□□□□ -1.9
TY4A-JP47023 MOT1YPL082C 5604 nt3.19□□□□□ -1.9
TY4A-JP47023 YIL166CYIL166C 1629 nt3.19□□□□□ -1.9
TY4A-JP47023 TOP2YNL088W 4287 nt3.19□□□□□ -1.9
TY4A-JP47023 tF(GAA)DtF(GAA)D 73 nt3.19□□□□□ -1.9
TY4A-JP47023 tF(GAA)NtF(GAA)N 73 nt3.19□□□□□ -1.9
TY4A-JP47023 PAU10YDR542W 363 nt3.19□□□□□ -1.9
TY4A-JP47023 PAU11YGL261C 363 nt3.19□□□□□ -1.9
TY4A-JP47023 PAU4YLR461W 363 nt3.19□□□□□ -1.9
TY4A-JP47023 YBL108WYBL108W 306 nt3.19□□□□□ -1.9
TY4A-JP47023 VTC4YJL012C 2166 nt3.19□□□□□ -1.9
TY4A-JP47023 YPK1YKL126W 2043 nt3.19□□□□□ -1.9
TY4A-JP47023 RLI1YDR091C 1827 nt3.19□□□□□ -1.9
TY4A-JP47023 AST2YER101C 1293 nt3.18□□□□□ -1.9
TY4A-JP47023 tK(UUU)DtK(UUU)D 73 nt3.18□□□□□ -1.9
TY4A-JP47023 tK(UUU)G1tK(UUU)G1 73 nt3.18□□□□□ -1.9
TY4A-JP47023 tK(UUU)G2tK(UUU)G2 73 nt3.18□□□□□ -1.9
TY4A-JP47023 tK(UUU)KtK(UUU)K 73 nt3.18□□□□□ -1.9
TY4A-JP47023 tK(UUU)LtK(UUU)L 73 nt3.18□□□□□ -1.9
TY4A-JP47023 tK(UUU)OtK(UUU)O 73 nt3.18□□□□□ -1.9
TY4A-JP47023 tK(UUU)PtK(UUU)P 73 nt3.18□□□□□ -1.9
TY4A-JP47023 GOT1YMR292W 417 nt3.18□□□□□ -1.9
TY4A-JP47023 YOR073W-AYOR073W-A 234 nt3.18□□□□□ -1.9
TY4A-JP47023 BRO1YPL084W 2535 nt3.18□□□□□ -1.9
TY4A-JP47023 ECM25YJL201W 1800 nt3.17□□□□□ -1.9
TY4A-JP47023 NAB3YPL190C 2409 nt3.17□□□□□ -1.9
TY4A-JP47023 YDR413CYDR413C 576 nt3.17□□□□□ -1.9
TY4A-JP47023 YKL083WYKL083W 615 nt3.17□□□□□ -1.9
TY4A-JP47023 MRPL31YKL138C 396 nt3.17□□□□□ -1.9
TY4A-JP47023 YAR053WYAR053W 297 nt3.17□□□□□ -1.9
TY4A-JP47023 COX7YMR256C 183 nt3.17□□□□□ -1.9
TY4A-JP47023 COX1Q0045 1605 nt3.17□□□□□ -1.9
TY4A-JP47023 TPS2YDR074W 2691 nt3.17□□□□□ -1.9
TY4A-JP47023 SNT1YCR033W 3681 nt3.16□□□□□ -1.9
TY4A-JP47023 SDC1YDR469W 528 nt3.16□□□□□ -1.9
TY4A-JP47023 YPL238CYPL238C 390 nt3.16□□□□□ -1.9
TY4A-JP47023 YMR317WYMR317W 3423 nt3.16□□□□□ -1.9
TY4A-JP47023 VPS41YDR080W 2979 nt3.15□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 103.9 ms