Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 MGR1YCL044C 1254 nt2.65□□□□□ -1.99
TY2A-FP0CX61 TFC4YGR047C 3078 nt2.65□□□□□ -1.99
TY2A-FP0CX61 YDR118W-AYDR118W-A 117 nt2.64□□□□□ -1.99
TY2A-FP0CX61 YDR194W-AYDR194W-A 153 nt2.64□□□□□ -1.99
TY2A-FP0CX61 YHR214W-AYHR214W-A 486 nt2.64□□□□□ -1.99
TY2A-FP0CX61 RNP1YLL046C 750 nt2.64□□□□□ -1.99
TY2A-FP0CX61 YAR068WYAR068W 486 nt2.64□□□□□ -1.99
TY2A-FP0CX61 SEN15YMR059W 387 nt2.64□□□□□ -1.99
TY2A-FP0CX61 ICY1YMR195W 384 nt2.64□□□□□ -1.99
TY2A-FP0CX61 YOR105WYOR105W 327 nt2.64□□□□□ -1.99
TY2A-FP0CX61 YBR032WYBR032W 303 nt2.64□□□□□ -1.99
TY2A-FP0CX61 YPR012WYPR012W 255 nt2.64□□□□□ -1.99
TY2A-FP0CX61 MSS18YPR134W 807 nt2.64□□□□□ -1.99
TY2A-FP0CX61 YPR170W-AYPR170W-A 186 nt2.64□□□□□ -1.99
TY2A-FP0CX61 JIP5YPR169W 1479 nt2.64□□□□□ -1.99
TY2A-FP0CX61 SDC25YLL016W 3147 nt2.64□□□□□ -1.99
TY2A-FP0CX61 ASG1YIL130W 2895 nt2.63□□□□□ -1.99
TY2A-FP0CX61 RAM2YKL019W 951 nt2.63□□□□□ -1.99
TY2A-FP0CX61 LCL2YLR104W 396 nt2.63□□□□□ -1.99
TY2A-FP0CX61 YLR458WYLR458W 381 nt2.63□□□□□ -1.99
TY2A-FP0CX61 YML037CYML037C 1023 nt2.63□□□□□ -1.99
TY2A-FP0CX61 PEX17YNL214W 600 nt2.63□□□□□ -1.99
TY2A-FP0CX61 CRS5YOR031W 210 nt2.63□□□□□ -1.99
TY2A-FP0CX61 KSP1YHR082C 3090 nt2.63□□□□□ -1.99
TY2A-FP0CX61 SKP2YNL311C 2292 nt2.63□□□□□ -1.99
TY2A-FP0CX61 YPR089WYPR089W 2667 nt2.63□□□□□ -1.99
TY2A-FP0CX61 BCK1YJL095W 4437 nt2.62□□□□□ -1.99
TY2A-FP0CX61 INP52YNL106C 3552 nt2.62□□□□□ -1.99
TY2A-FP0CX61 UTP14YML093W 2700 nt2.62□□□□□ -1.99
TY2A-FP0CX61 YER188C-AYER188C-A 300 nt2.62□□□□□ -1.99
TY2A-FP0CX61 snR13snR13 124 nt2.62□□□□□ -1.99
TY2A-FP0CX61 RPS12YOR369C 432 nt2.62□□□□□ -1.99
TY2A-FP0CX61 LEE1YPL054W 906 nt2.62□□□□□ -1.99
TY2A-FP0CX61 CAF120YNL278W 3183 nt2.62□□□□□ -1.99
TY2A-FP0CX61 SKT5YBL061C 2091 nt2.62□□□□□ -1.99
TY2A-FP0CX61 YPK1YKL126W 2043 nt2.61□□□□□ -1.99
TY2A-FP0CX61 SLH1YGR271W 5904 nt2.61□□□□□ -1.99
TY2A-FP0CX61 YDL068WYDL068W 330 nt2.61□□□□□ -1.99
TY2A-FP0CX61 AAD16YFL057C 459 nt2.61□□□□□ -1.99
TY2A-FP0CX61 RPL36AYMR194W 303 nt2.61□□□□□ -1.99
TY2A-FP0CX61 CDC33YOL139C 642 nt2.61□□□□□ -1.99
TY2A-FP0CX61 ATP15YPL271W 189 nt2.61□□□□□ -1.99
TY2A-FP0CX61 YPL276WYPL276W 438 nt2.61□□□□□ -1.99
TY2A-FP0CX61 YBT1YLL048C 4986 nt2.61□□□□□ -1.99
TY2A-FP0CX61 PES4YFR023W 1836 nt2.61□□□□□ -1.99
TY2A-FP0CX61 YJL016WYJL016W 1686 nt2.6□□□□□ -1.99
TY2A-FP0CX61 PRP6YBR055C 2700 nt2.6□□□□□ -1.99
TY2A-FP0CX61 ATP17YDR377W 306 nt2.6□□□□□ -1.99
TY2A-FP0CX61 YGR025WYGR025W 303 nt2.6□□□□□ -1.99
TY2A-FP0CX61 YGR121W-AYGR121W-A 216 nt2.6□□□□□ -1.99
TY2A-FP0CX61 tT(UGU)Q1tT(UGU)Q1 76 nt2.6□□□□□ -1.99
TY2A-FP0CX61 IRC19YLL033W 693 nt2.6□□□□□ -1.99
TY2A-FP0CX61 YPR039WYPR039W 336 nt2.6□□□□□ -1.99
TY2A-FP0CX61 YGR067CYGR067C 2415 nt2.6□□□□□ -1.99
TY2A-FP0CX61 RGA2YDR379W 3030 nt2.59□□□□□ -1.99
TY2A-FP0CX61 RPL40AYIL148W 387 nt2.59□□□□□ -1.99
TY2A-FP0CX61 YJL202CYJL202C 348 nt2.59□□□□□ -1.99
TY2A-FP0CX61 JIP3YLR331C 378 nt2.59□□□□□ -1.99
TY2A-FP0CX61 CCW14YLR390W-A 717 nt2.59□□□□□ -1.99
TY2A-FP0CX61 YHR078WYHR078W 1659 nt2.59□□□□□ -2
TY2A-FP0CX61 YPL150WYPL150W 2706 nt2.59□□□□□ -2
TY2A-FP0CX61 NUP82YJL061W 2142 nt2.59□□□□□ -2
TY2A-FP0CX61 AYT1YLL063C 1425 nt2.59□□□□□ -2
TY2A-FP0CX61 ESL2YKR096W 3588 nt2.59□□□□□ -2
TY2A-FP0CX61 NIC96YFR002W 2520 nt2.59□□□□□ -2
TY2A-FP0CX61 SUL1YBR294W 2580 nt2.58□□□□□ -2
TY2A-FP0CX61 YER079WYER079W 633 nt2.58□□□□□ -2
TY2A-FP0CX61 YIL174WYIL174W 228 nt2.58□□□□□ -2
TY2A-FP0CX61 NCE101YJL205C 162 nt2.58□□□□□ -2
TY2A-FP0CX61 YJL222W-AYJL222W-A 228 nt2.58□□□□□ -2
TY2A-FP0CX61 YAL042C-AYAL042C-A 378 nt2.58□□□□□ -2
TY2A-FP0CX61 YOL159CYOL159C 516 nt2.58□□□□□ -2
TY2A-FP0CX61 YJL181WYJL181W 1836 nt2.57□□□□□ -2
TY2A-FP0CX61 ECM29YHL030W 5607 nt2.57□□□□□ -2
TY2A-FP0CX61 YDR269CYDR269C 324 nt2.57□□□□□ -2
TY2A-FP0CX61 CRG1YHR209W 876 nt2.57□□□□□ -2
TY2A-FP0CX61 RPS22AYJL190C 393 nt2.57□□□□□ -2
TY2A-FP0CX61 YLR334CYLR334C 381 nt2.57□□□□□ -2
TY2A-FP0CX61 CYR1YJL005W 6081 nt2.57□□□□□ -2
TY2A-FP0CX61 GEA1YJR031C 4227 nt2.57□□□□□ -2
TY2A-FP0CX61 VPS64YDR200C 1815 nt2.56□□□□□ -2
TY2A-FP0CX61 RTT10YPL183C 3042 nt2.56□□□□□ -2
TY2A-FP0CX61 AXL1YPR122W 3627 nt2.56□□□□□ -2
TY2A-FP0CX61 RPS1AYLR441C 768 nt2.56□□□□□ -2
TY2A-FP0CX61 ZEO1YOL109W 342 nt2.56□□□□□ -2
TY2A-FP0CX61 SEC26YDR238C 2922 nt2.56□□□□□ -2
TY2A-FP0CX61 RAX2YLR084C 3663 nt2.55□□□□□ -2
TY2A-FP0CX61 PRP8YHR165C 7242 nt2.55□□□□□ -2
TY2A-FP0CX61 YER087C-AYER087C-A 552 nt2.55□□□□□ -2
TY2A-FP0CX61 PNC1YGL037C 651 nt2.55□□□□□ -2
TY2A-FP0CX61 YHL046W-AYHL046W-A 327 nt2.55□□□□□ -2
TY2A-FP0CX61 RRF1YHR038W 693 nt2.55□□□□□ -2
TY2A-FP0CX61 YHR175W-AYHR175W-A 150 nt2.55□□□□□ -2
TY2A-FP0CX61 HRD3YLR207W 2502 nt2.55□□□□□ -2
TY2A-FP0CX61 YML084WYML084W 309 nt2.55□□□□□ -2
TY2A-FP0CX61 ERP4YOR016C 624 nt2.55□□□□□ -2
TY2A-FP0CX61 YSW1YBR148W 1830 nt2.55□□□□□ -2
TY2A-FP0CX61 RPO41YFL036W 4056 nt2.55□□□□□ -2
TY2A-FP0CX61 NFT1YKR103W 3657 nt2.55□□□□□ -2
TY2A-FP0CX61 SNU114YKL173W 3027 nt2.55□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 53.3 ms