Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC00271P0C7V0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC00271P0C7V0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC00271P0C7V0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00271P0C7V0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00271P0C7V0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00271P0C7V0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00271P0C7V0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
LINC00271P0C7V0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LINC00271P0C7V0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 PGM5P4-201ENST00000421970 445 ntBASIC21.82■■□□□ 1.08
LINC00271P0C7V0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.82■■□□□ 1.08
LINC00271P0C7V0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC00271P0C7V0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.81■■□□□ 1.08
LINC00271P0C7V0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LINC00271P0C7V0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
LINC00271P0C7V0 AC026471.5-201ENST00000615068 467 ntBASIC21.8■■□□□ 1.08
LINC00271P0C7V0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms