Protein–RNA interactions for Protein: Q9NQX0

PRDM6, Putative histone-lysine N-methyltransferase PRDM6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6Q9NQX0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.52■■□□□ 1.04
PRDM6Q9NQX0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.52■■□□□ 1.04
PRDM6Q9NQX0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRDM6Q9NQX0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRDM6Q9NQX0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRDM6Q9NQX0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 AL353807.1-201ENST00000427475 662 ntBASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.51■■□□□ 1.03
PRDM6Q9NQX0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 AL691432.3-201ENST00000621860 400 ntBASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.5■■□□□ 1.03
PRDM6Q9NQX0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 AC003102.1-202ENST00000563394 1796 ntBASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 LIN28AP1-201ENST00000429574 405 ntBASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 AC022616.7-201ENST00000525383 220 ntBASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRDM6Q9NQX0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 C11orf96-202ENST00000528572 1834 ntBASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 LINC01124-201ENST00000409786 2117 ntBASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 AK4P3-201ENST00000418260 669 ntBASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 ATP5G1P1-201ENST00000448724 379 ntBASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PRDM6Q9NQX0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 AL390719.1-204ENST00000412397 1219 ntBASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 AC004263.2-201ENST00000617183 678 ntBASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRDM6Q9NQX0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 AC027702.1-201ENST00000563810 1770 ntBASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.46■■□□□ 1.03
PRDM6Q9NQX0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.45■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms