RNA–Protein interactions for RNA: ENST00000351079.8

COPE-203, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-203ENST00000351079 NISCHQ9Y2I1 1504 aa46.15■■■■■ 4.98
COPE-203ENST00000351079 CCDC180Q9P1Z9 1646 aa41.35■■■■■ 4.21
COPE-203ENST00000351079 ABCC9O60706 1549 aa41.3■■■■■ 4.2
COPE-203ENST00000351079 RB1CC1Q8TDY2 1594 aa39.36■■■■□ 3.89
COPE-203ENST00000351079 NACADO15069 1562 aa39.1■■■■□ 3.85
COPE-203ENST00000351079 DCAF8L2P0C7V8 631 aa38.98■■■■□ 3.83
COPE-203ENST00000351079 MYO15BQ96JP2 1530 aa38.58■■■■□ 3.77
COPE-203ENST00000351079 DNAJC5BQ9UF47 199 aa38.53■■■■□ 3.76
COPE-203ENST00000351079 PABPN1Q86U42 306 aaKnown RBP eCLIP38.47■■■■□ 3.751e-10■■■■□ 21.1
COPE-203ENST00000351079 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
COPE-203ENST00000351079 UNC13AQ9UPW8 1703 aa38.29■■■■□ 3.72
COPE-203ENST00000351079 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
COPE-203ENST00000351079 BICRAQ9NZM4 1560 aa38.11■■■■□ 3.69
COPE-203ENST00000351079 SCRIBQ14160 1630 aa37.74■■■■□ 3.63
COPE-203ENST00000351079 SHROOM4Q9ULL8 1493 aa37.74■■■■□ 3.63
COPE-203ENST00000351079 CC2D2AQ9P2K1 1620 aa37.26■■■■□ 3.56
COPE-203ENST00000351079 EIF4G1Q04637 1599 aaKnown RBP37.24■■■■□ 3.55
COPE-203ENST00000351079 CECR2Q9BXF3 1484 aa37.2■■■■□ 3.55
COPE-203ENST00000351079 NCAPD3P42695 1498 aa36.08■■■■□ 3.37
COPE-203ENST00000351079 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
COPE-203ENST00000351079 SMARCA4P51532 1647 aa35.97■■■■□ 3.35
COPE-203ENST00000351079 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
COPE-203ENST00000351079 BAZ1AQ9NRL2 1556 aaPredicted RBP35.85■■■■□ 3.33
COPE-203ENST00000351079 HMGXB3Q12766 1538 aa35.85■■■■□ 3.33
COPE-203ENST00000351079 ERCC6Q03468 1493 aa35.73■■■■□ 3.31
COPE-203ENST00000351079 BAZ1BQ9UIG0 1483 aaKnown RBP35.71■■■■□ 3.31
COPE-203ENST00000351079 PEG3Q9GZU2 1588 aa35.6■■■■□ 3.29
COPE-203ENST00000351079 CUX2O14529 1486 aa35.56■■■■□ 3.28
COPE-203ENST00000351079 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
COPE-203ENST00000351079 NESP48681 1621 aa35.47■■■■□ 3.27
COPE-203ENST00000351079 DNAJC5Q9H3Z4 198 aa35.35■■■■□ 3.25
COPE-203ENST00000351079 LAMC3Q9Y6N6 1575 aa35.26■■■■□ 3.24
COPE-203ENST00000351079 PDS5BQ9NTI5 1447 aa35.11■■■■□ 3.21
COPE-203ENST00000351079 WIZO95785 1651 aa35.1■■■■□ 3.21
COPE-203ENST00000351079 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
COPE-203ENST00000351079 CADPSQ9ULU8 1353 aa35.01■■■■□ 3.2
COPE-203ENST00000351079 KIF21AQ7Z4S6 1674 aa34.97■■■■□ 3.19
COPE-203ENST00000351079 RSF1Q96T23 1441 aaPredicted RBP34.88■■■■□ 3.17
COPE-203ENST00000351079 MRC2Q9UBG0 1479 aa34.79■■■■□ 3.16
COPE-203ENST00000351079 TOP2AP11388 1531 aaKnown RBP34.75■■■■□ 3.15
COPE-203ENST00000351079 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
COPE-203ENST00000351079 WDR62O43379 1518 aa34.67■■■■□ 3.14
COPE-203ENST00000351079 FANCD2Q9BXW9 1451 aa34.65■■■■□ 3.14
COPE-203ENST00000351079 CFTRP13569 1480 aa34.63■■■■□ 3.13
COPE-203ENST00000351079 CCDC88BA6NC98 1476 aa34.32■■■■□ 3.08
COPE-203ENST00000351079 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
COPE-203ENST00000351079 PRDM2Q13029 1718 aa34.19■■■■□ 3.06
COPE-203ENST00000351079 IFT140Q96RY7 1462 aa33.99■■■■□ 3.03
COPE-203ENST00000351079 TOPBP1Q92547 1522 aa33.97■■■■□ 3.03
COPE-203ENST00000351079 OSCARQ8IYS5 282 aa33.94■■■■□ 3.02
COPE-203ENST00000351079 TRIM41Q8WV44 630 aa33.94■■■■□ 3.02
COPE-203ENST00000351079 ABCC8Q09428 1581 aa33.93■■■■□ 3.02
COPE-203ENST00000351079 ZNF608Q9ULD9 1512 aaPredicted RBP33.87■■■■□ 3.01
COPE-203ENST00000351079 DNMBPQ6XZF7 1577 aa33.86■■■■□ 3.01
COPE-203ENST00000351079 EIF4G3O43432 1585 aaKnown RBP33.7■■■□□ 2.99
COPE-203ENST00000351079 POLA1P09884 1462 aaPredicted RBP33.63■■■□□ 2.97
COPE-203ENST00000351079 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
COPE-203ENST00000351079 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.973e-7■■■■□ 21.7
COPE-203ENST00000351079 SOGA1O94964 1423 aa33.5■■■□□ 2.95
COPE-203ENST00000351079 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
COPE-203ENST00000351079 SUPT5HO00267 1087 aaKnown RBP33.48■■■□□ 2.95
COPE-203ENST00000351079 FGD5Q6ZNL6 1462 aa33.45■■■□□ 2.95
COPE-203ENST00000351079 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
COPE-203ENST00000351079 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
COPE-203ENST00000351079 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
COPE-203ENST00000351079 TDRD9Q8NDG6 1382 aaKnown RBP33.42■■■□□ 2.94
COPE-203ENST00000351079 FBLN2P98095 1184 aa33.41■■■□□ 2.94
COPE-203ENST00000351079 CUX1P39880 1505 aa33.41■■■□□ 2.94
COPE-203ENST00000351079 ARHGEF11O15085 1522 aa33.4■■■□□ 2.94
COPE-203ENST00000351079 CHD1O14646 1710 aa33.36■■■□□ 2.93
COPE-203ENST00000351079 WDR97A6NE52 1622 aa33.34■■■□□ 2.93
COPE-203ENST00000351079 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
COPE-203ENST00000351079 GRIN2BQ13224 1484 aa33.22■■■□□ 2.91
COPE-203ENST00000351079 MAGI1Q96QZ7 1491 aaPredicted RBP33.2■■■□□ 2.91
COPE-203ENST00000351079 CHMP7Q8WUX9 453 aaPredicted RBP33.17■■■□□ 2.9
COPE-203ENST00000351079 CYB5RLQ6IPT4 315 aa33.15■■■□□ 2.9
COPE-203ENST00000351079 GAPVD1Q14C86 1478 aa33.1■■■□□ 2.89
COPE-203ENST00000351079 SYNJ2O15056 1496 aa33.09■■■□□ 2.89
COPE-203ENST00000351079 SYNJ1O43426 1573 aa33.08■■■□□ 2.89
COPE-203ENST00000351079 ABCA10Q8WWZ4 1543 aa33.07■■■□□ 2.89
COPE-203ENST00000351079 ARAP1Q96P48 1450 aa33.07■■■□□ 2.88
COPE-203ENST00000351079 CLASP1Q7Z460 1538 aa33.03■■■□□ 2.88
COPE-203ENST00000351079 WRNQ14191 1432 aaPredicted RBP eCLIP33.01■■■□□ 2.87
COPE-203ENST00000351079 PBRM1Q86U86 1689 aa33.01■■■□□ 2.87
COPE-203ENST00000351079 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
COPE-203ENST00000351079 TOP2BQ02880 1626 aa32.91■■■□□ 2.86
COPE-203ENST00000351079 BIVM-ERCC5R4GMW8 1640 aa32.88■■■□□ 2.85
COPE-203ENST00000351079 TRHP20396 242 aaPredicted RBP32.8■■■□□ 2.84
COPE-203ENST00000351079 GRIN2AQ12879 1464 aa32.78■■■□□ 2.84
COPE-203ENST00000351079 ADAMTS12P58397 1594 aa32.77■■■□□ 2.84
COPE-203ENST00000351079 FHAD1B1AJZ9 1412 aa32.7■■■□□ 2.83
COPE-203ENST00000351079 ERICH3Q5RHP9 1530 aa32.66■■■□□ 2.82
COPE-203ENST00000351079 NUP160Q12769 1436 aa32.64■■■□□ 2.82
COPE-203ENST00000351079 CEP170Q5SW79 1584 aa32.62■■■□□ 2.81
COPE-203ENST00000351079 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
COPE-203ENST00000351079 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
COPE-203ENST00000351079 KIF27Q86VH2 1401 aa32.34■■■□□ 2.77
COPE-203ENST00000351079 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
COPE-203ENST00000351079 JPH4Q96JJ6 628 aa32.3■■■□□ 2.76
COPE-203ENST00000351079 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms