RNA–Protein interactions for RNA: ENST00000588500.1

SMIM22-203, Transcript of small integral membrane protein 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMIM22, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-203ENST00000588500 NISCHQ9Y2I1 1504 aa44.09■■■■■ 4.65
SMIM22-203ENST00000588500 ABCC9O60706 1549 aa40.7■■■■■ 4.11
SMIM22-203ENST00000588500 CCDC180Q9P1Z9 1646 aa39.95■■■■□ 3.99
SMIM22-203ENST00000588500 DNAJC5BQ9UF47 199 aa38.71■■■■□ 3.79
SMIM22-203ENST00000588500 RB1CC1Q8TDY2 1594 aa38.39■■■■□ 3.74
SMIM22-203ENST00000588500 NACADO15069 1562 aa37.9■■■■□ 3.66
SMIM22-203ENST00000588500 PABPN1Q86U42 306 aaKnown RBP eCLIP37.74■■■■□ 3.63
SMIM22-203ENST00000588500 DCAF8L2P0C7V8 631 aa37.66■■■■□ 3.62
SMIM22-203ENST00000588500 UNC13AQ9UPW8 1703 aa37.58■■■■□ 3.61
SMIM22-203ENST00000588500 BICRAQ9NZM4 1560 aa37.25■■■■□ 3.55
SMIM22-203ENST00000588500 MYO15BQ96JP2 1530 aa37.05■■■■□ 3.52
SMIM22-203ENST00000588500 CC2D2AQ9P2K1 1620 aa36.72■■■■□ 3.47
SMIM22-203ENST00000588500 CECR2Q9BXF3 1484 aa36.71■■■■□ 3.47
SMIM22-203ENST00000588500 SHROOM4Q9ULL8 1493 aa36.63■■■■□ 3.45
SMIM22-203ENST00000588500 EIF4G1Q04637 1599 aaKnown RBP36.44■■■■□ 3.42
SMIM22-203ENST00000588500 SCRIBQ14160 1630 aa36.43■■■■□ 3.42
SMIM22-203ENST00000588500 ZCCHC6Q5VYS8 1495 aaKnown RBP36.4■■■■□ 3.42
SMIM22-203ENST00000588500 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.4
SMIM22-203ENST00000588500 DNAJC5Q9H3Z4 198 aa36.08■■■■□ 3.37
SMIM22-203ENST00000588500 CUX2O14529 1486 aa35.32■■■■□ 3.24
SMIM22-203ENST00000588500 ERCC6Q03468 1493 aa35.23■■■■□ 3.23
SMIM22-203ENST00000588500 NCAPD3P42695 1498 aa34.94■■■■□ 3.18
SMIM22-203ENST00000588500 ATAD2BQ9ULI0 1458 aa34.78■■■■□ 3.16
SMIM22-203ENST00000588500 NESP48681 1621 aa34.73■■■■□ 3.15
SMIM22-203ENST00000588500 SMARCA2P51531 1590 aa34.68■■■■□ 3.14
SMIM22-203ENST00000588500 HMGXB3Q12766 1538 aa34.67■■■■□ 3.14
SMIM22-203ENST00000588500 SMARCA4P51532 1647 aa34.61■■■■□ 3.13
SMIM22-203ENST00000588500 THOC2Q8NI27 1593 aaKnown RBP34.53■■■■□ 3.12
SMIM22-203ENST00000588500 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
SMIM22-203ENST00000588500 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
SMIM22-203ENST00000588500 LAMC3Q9Y6N6 1575 aa34.35■■■■□ 3.09
SMIM22-203ENST00000588500 KIF21AQ7Z4S6 1674 aa34.33■■■■□ 3.09
SMIM22-203ENST00000588500 BAZ1AQ9NRL2 1556 aaPredicted RBP34.32■■■■□ 3.08
SMIM22-203ENST00000588500 PEG3Q9GZU2 1588 aa34.19■■■■□ 3.06
SMIM22-203ENST00000588500 PDS5BQ9NTI5 1447 aa34.16■■■■□ 3.06
SMIM22-203ENST00000588500 MROH2BQ7Z745 1585 aa33.99■■■■□ 3.03
SMIM22-203ENST00000588500 MRC2Q9UBG0 1479 aa33.94■■■■□ 3.02
SMIM22-203ENST00000588500 WDR62O43379 1518 aa33.87■■■■□ 3.01
SMIM22-203ENST00000588500 CADPSQ9ULU8 1353 aa33.86■■■■□ 3.01
SMIM22-203ENST00000588500 CEP164Q9UPV0 1460 aa33.69■■■□□ 2.98
SMIM22-203ENST00000588500 WIZO95785 1651 aa33.61■■■□□ 2.97
SMIM22-203ENST00000588500 OSCARQ8IYS5 282 aa33.57■■■□□ 2.96
SMIM22-203ENST00000588500 FANCD2Q9BXW9 1451 aa33.55■■■□□ 2.96
SMIM22-203ENST00000588500 CFTRP13569 1480 aa33.33■■■□□ 2.93
SMIM22-203ENST00000588500 URB2Q14146 1524 aaKnown RBP33.31■■■□□ 2.92
SMIM22-203ENST00000588500 RIMBP3CA6NJZ7 1639 aa33.3■■■□□ 2.92
SMIM22-203ENST00000588500 RIMBP3BA6NNM3 1639 aa33.3■■■□□ 2.92
SMIM22-203ENST00000588500 RIMBP3Q9UFD9 1639 aa33.3■■■□□ 2.92
SMIM22-203ENST00000588500 TOP2AP11388 1531 aaKnown RBP33.1■■■□□ 2.89
SMIM22-203ENST00000588500 PRDM2Q13029 1718 aa33.08■■■□□ 2.89
SMIM22-203ENST00000588500 ARHGEF11O15085 1522 aa33.08■■■□□ 2.89
SMIM22-203ENST00000588500 ZNF608Q9ULD9 1512 aaPredicted RBP33.03■■■□□ 2.88
SMIM22-203ENST00000588500 IFT140Q96RY7 1462 aa32.99■■■□□ 2.87
SMIM22-203ENST00000588500 RSF1Q96T23 1441 aaPredicted RBP32.98■■■□□ 2.87
SMIM22-203ENST00000588500 CYB5RLQ6IPT4 315 aa32.89■■■□□ 2.86
SMIM22-203ENST00000588500 EIF4G3O43432 1585 aaKnown RBP32.87■■■□□ 2.85
SMIM22-203ENST00000588500 TOPBP1Q92547 1522 aa32.83■■■□□ 2.85
SMIM22-203ENST00000588500 TRHP20396 242 aaPredicted RBP32.82■■■□□ 2.84
SMIM22-203ENST00000588500 CHD1O14646 1710 aa32.8■■■□□ 2.84
SMIM22-203ENST00000588500 ARAP1Q96P48 1450 aa32.7■■■□□ 2.83
SMIM22-203ENST00000588500 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
SMIM22-203ENST00000588500 ABCC8Q09428 1581 aa32.68■■■□□ 2.82
SMIM22-203ENST00000588500 DNMBPQ6XZF7 1577 aa32.66■■■□□ 2.82
SMIM22-203ENST00000588500 FBLN2P98095 1184 aa32.64■■■□□ 2.82
SMIM22-203ENST00000588500 AQRO60306 1485 aaKnown RBP eCLIP32.63■■■□□ 2.81
SMIM22-203ENST00000588500 TARBP1Q13395 1621 aaKnown RBP32.59■■■□□ 2.81
SMIM22-203ENST00000588500 POLA1P09884 1462 aaPredicted RBP32.44■■■□□ 2.78
SMIM22-203ENST00000588500 AEBP2Q6ZN18 517 aaPredicted RBP32.44■■■□□ 2.78
SMIM22-203ENST00000588500 RAD54L2Q9Y4B4 1467 aa32.35■■■□□ 2.77
SMIM22-203ENST00000588500 TDRD9Q8NDG6 1382 aaKnown RBP32.32■■■□□ 2.76
SMIM22-203ENST00000588500 SNAPC4Q5SXM2 1469 aa32.31■■■□□ 2.76
SMIM22-203ENST00000588500 CLASP1Q7Z460 1538 aa32.3■■■□□ 2.76
SMIM22-203ENST00000588500 SYNJ1O43426 1573 aa32.28■■■□□ 2.76
SMIM22-203ENST00000588500 SOGA1O94964 1423 aa32.26■■■□□ 2.76
SMIM22-203ENST00000588500 CHMP7Q8WUX9 453 aaPredicted RBP32.22■■■□□ 2.75
SMIM22-203ENST00000588500 WDR97A6NE52 1622 aa32.19■■■□□ 2.74
SMIM22-203ENST00000588500 FGD5Q6ZNL6 1462 aa32.16■■■□□ 2.74
SMIM22-203ENST00000588500 MAGI1Q96QZ7 1491 aaPredicted RBP32.16■■■□□ 2.74
SMIM22-203ENST00000588500 GRIN2BQ13224 1484 aa32.09■■■□□ 2.73
SMIM22-203ENST00000588500 SYNJ2O15056 1496 aa32.06■■■□□ 2.72
SMIM22-203ENST00000588500 GAPVD1Q14C86 1478 aa32.03■■■□□ 2.72
SMIM22-203ENST00000588500 PBRM1Q86U86 1689 aa32.01■■■□□ 2.71
SMIM22-203ENST00000588500 CUX1P39880 1505 aa32■■■□□ 2.71
SMIM22-203ENST00000588500 ERCC6L2Q5T890 1561 aa31.77■■■□□ 2.68
SMIM22-203ENST00000588500 ABCA5Q8WWZ7 1642 aa31.77■■■□□ 2.68
SMIM22-203ENST00000588500 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.67
SMIM22-203ENST00000588500 GRIN2AQ12879 1464 aa31.68■■■□□ 2.66
SMIM22-203ENST00000588500 CEP170Q5SW79 1584 aa31.66■■■□□ 2.66
SMIM22-203ENST00000588500 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
SMIM22-203ENST00000588500 KIF13AQ9H1H9 1805 aa31.6■■■□□ 2.65
SMIM22-203ENST00000588500 NUP160Q12769 1436 aa31.56■■■□□ 2.64
SMIM22-203ENST00000588500 SHROOM2Q13796 1616 aa31.53■■■□□ 2.64
SMIM22-203ENST00000588500 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
SMIM22-203ENST00000588500 FHAD1B1AJZ9 1412 aa31.43■■■□□ 2.62
SMIM22-203ENST00000588500 PRG4Q92954 1404 aaPredicted RBP31.36■■■□□ 2.61
SMIM22-203ENST00000588500 BIVM-ERCC5R4GMW8 1640 aa31.31■■■□□ 2.6
SMIM22-203ENST00000588500 FAM69CQ0P6D2 419 aa31.31■■■□□ 2.6
SMIM22-203ENST00000588500 ERICH3Q5RHP9 1530 aa31.3■■■□□ 2.6
SMIM22-203ENST00000588500 TOP2BQ02880 1626 aa31.28■■■□□ 2.6
SMIM22-203ENST00000588500 ABCC10Q5T3U5 1492 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms