Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 AC007322.3-201ENST00000426526 701 ntBASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 AC066615.1-201ENST00000640911 628 ntBASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNAP47Q5SQN1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 CYP2T3P-201ENST00000601990 817 ntBASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNAP47Q5SQN1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNAP47Q5SQN1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNAP47Q5SQN1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 AC008687.6-201ENST00000596318 630 ntBASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNAP47Q5SQN1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 ITM2C-210ENST00000620962 501 ntBASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNAP47Q5SQN1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNAP47Q5SQN1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms