Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YCR099CYCR099C 468 nt1.8□□□□□ -2.12
RRP40Q08285 RPS26BYER131W 360 nt1.8□□□□□ -2.12
RRP40Q08285 YKR051WYKR051W 1257 nt1.8□□□□□ -2.12
RRP40Q08285 PAI3YMR174C 207 nt1.8□□□□□ -2.12
RRP40Q08285 YOL106WYOL106W 354 nt1.8□□□□□ -2.12
RRP40Q08285 SPR2YOR214C 711 nt1.8□□□□□ -2.12
RRP40Q08285 MES1YGR264C 2256 nt1.79□□□□□ -2.12
RRP40Q08285 SEC31YDL195W 3822 nt1.79□□□□□ -2.12
RRP40Q08285 NTF2YER009W 378 nt1.79□□□□□ -2.12
RRP40Q08285 SMD3YLR147C 306 nt1.79□□□□□ -2.12
RRP40Q08285 YNR021WYNR021W 1215 nt1.79□□□□□ -2.12
RRP40Q08285 SFM1YOR021C 642 nt1.79□□□□□ -2.12
RRP40Q08285 RXT2YBR095C 1293 nt1.79□□□□□ -2.12
RRP40Q08285 SUS1YBR111W-A 291 nt1.79□□□□□ -2.12
RRP40Q08285 SHS1YDL225W 1656 nt1.79□□□□□ -2.12
RRP40Q08285 YJL016WYJL016W 1686 nt1.79□□□□□ -2.12
RRP40Q08285 SNF12YNR023W 1701 nt1.79□□□□□ -2.12
RRP40Q08285 RRP6YOR001W 2202 nt1.78□□□□□ -2.12
RRP40Q08285 DFG16YOR030W 1860 nt1.78□□□□□ -2.12
RRP40Q08285 YFR057WYFR057W 456 nt1.78□□□□□ -2.12
RRP40Q08285 CAP1YKL007W 807 nt1.78□□□□□ -2.12
RRP40Q08285 GIM5YML094W 492 nt1.78□□□□□ -2.12
RRP40Q08285 RPS16AYMR143W 432 nt1.78□□□□□ -2.12
RRP40Q08285 ASG1YIL130W 2895 nt1.78□□□□□ -2.12
RRP40Q08285 IST2YBR086C 2841 nt1.78□□□□□ -2.12
RRP40Q08285 RUD3YOR216C 1455 nt1.77□□□□□ -2.13
RRP40Q08285 YLR379WYLR379W 375 nt1.77□□□□□ -2.13
RRP40Q08285 YBL068W-AYBL068W-A 237 nt1.77□□□□□ -2.13
RRP40Q08285 MUD1YBR119W 897 nt1.77□□□□□ -2.13
RRP40Q08285 SAG1YJR004C 1953 nt1.77□□□□□ -2.13
RRP40Q08285 YCR081C-AYCR081C-A 237 nt1.76□□□□□ -2.13
RRP40Q08285 RSM27YGR215W 333 nt1.76□□□□□ -2.13
RRP40Q08285 SPC2YML055W 537 nt1.76□□□□□ -2.13
RRP40Q08285 YMR272W-BYMR272W-B 108 nt1.76□□□□□ -2.13
RRP40Q08285 VID24YBR105C 1089 nt1.76□□□□□ -2.13
RRP40Q08285 RNH70YGR276C 1662 nt1.76□□□□□ -2.13
RRP40Q08285 YDL157CYDL157C 357 nt1.75□□□□□ -2.13
RRP40Q08285 RSM28YDR494W 1086 nt1.75□□□□□ -2.13
RRP40Q08285 YFR056CYFR056C 369 nt1.75□□□□□ -2.13
RRP40Q08285 COX13YGL191W 390 nt1.75□□□□□ -2.13
RRP40Q08285 YHR210CYHR210C 1026 nt1.75□□□□□ -2.13
RRP40Q08285 YET1YKL065C 621 nt1.75□□□□□ -2.13
RRP40Q08285 YOL150CYOL150C 312 nt1.75□□□□□ -2.13
RRP40Q08285 YOR392WYOR392W 444 nt1.75□□□□□ -2.13
RRP40Q08285 NSL1YPL233W 651 nt1.75□□□□□ -2.13
RRP40Q08285 MED8YBR193C 672 nt1.75□□□□□ -2.13
RRP40Q08285 IPT1YDR072C 1584 nt1.75□□□□□ -2.13
RRP40Q08285 FIG2YCR089W 4830 nt1.75□□□□□ -2.13
RRP40Q08285 PEX8YGR077C 1770 nt1.75□□□□□ -2.13
RRP40Q08285 LRE1YCL051W 1752 nt1.75□□□□□ -2.13
RRP40Q08285 CDC60YPL160W 3273 nt1.74□□□□□ -2.13
RRP40Q08285 SSF1YHR066W 1362 nt1.74□□□□□ -2.13
RRP40Q08285 MEC1YBR136W 7107 nt1.74□□□□□ -2.13
RRP40Q08285 MET18YIL128W 3099 nt1.74□□□□□ -2.13
RRP40Q08285 ATG9YDL149W 2994 nt1.74□□□□□ -2.13
RRP40Q08285 YGL165CYGL165C 579 nt1.74□□□□□ -2.13
RRP40Q08285 YGR226CYGR226C 210 nt1.74□□□□□ -2.13
RRP40Q08285 COX3Q0275 810 nt1.74□□□□□ -2.13
RRP40Q08285 TMA7YLR262C-A 195 nt1.74□□□□□ -2.13
RRP40Q08285 YPL119C-AYPL119C-A 264 nt1.74□□□□□ -2.13
RRP40Q08285 YNL034WYNL034W 1839 nt1.74□□□□□ -2.13
RRP40Q08285 DNF3YMR162C 4971 nt1.74□□□□□ -2.13
RRP40Q08285 STD1YOR047C 1335 nt1.73□□□□□ -2.13
RRP40Q08285 YDR199WYDR199W 366 nt1.73□□□□□ -2.13
RRP40Q08285 GPI8YDR331W 1236 nt1.73□□□□□ -2.13
RRP40Q08285 YER158W-AYER158W-A 216 nt1.73□□□□□ -2.13
RRP40Q08285 SHE2YKL130C 741 nt1.73□□□□□ -2.13
RRP40Q08285 VPS63YLR261C 327 nt1.73□□□□□ -2.13
RRP40Q08285 ATX2YOR079C 942 nt1.73□□□□□ -2.13
RRP40Q08285 YOR169CYOR169C 465 nt1.73□□□□□ -2.13
RRP40Q08285 ARL3YPL051W 597 nt1.73□□□□□ -2.13
RRP40Q08285 PDR8YLR266C 2106 nt1.73□□□□□ -2.13
RRP40Q08285 ECM25YJL201W 1800 nt1.73□□□□□ -2.13
RRP40Q08285 CDC37YDR168W 1521 nt1.72□□□□□ -2.13
RRP40Q08285 GUP1YGL084C 1683 nt1.72□□□□□ -2.13
RRP40Q08285 YDR537CYDR537C 606 nt1.72□□□□□ -2.13
RRP40Q08285 LOC1YFR001W 615 nt1.72□□□□□ -2.13
RRP40Q08285 CWC23YGL128C 852 nt1.72□□□□□ -2.13
RRP40Q08285 YGL230CYGL230C 444 nt1.72□□□□□ -2.13
RRP40Q08285 YGR242WYGR242W 309 nt1.72□□□□□ -2.13
RRP40Q08285 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
RRP40Q08285 YIL058WYIL058W 285 nt1.72□□□□□ -2.13
RRP40Q08285 VPS8YAL002W 3825 nt1.72□□□□□ -2.13
RRP40Q08285 YJL086CYJL086C 369 nt1.72□□□□□ -2.13
RRP40Q08285 YAL064WYAL064W 285 nt1.72□□□□□ -2.13
RRP40Q08285 SWM2YNR004W 441 nt1.72□□□□□ -2.13
RRP40Q08285 RTT107YHR154W 3213 nt1.72□□□□□ -2.13
RRP40Q08285 VPH1YOR270C 2523 nt1.72□□□□□ -2.13
RRP40Q08285 SSF2YDR312W 1362 nt1.72□□□□□ -2.13
RRP40Q08285 REV1YOR346W 2958 nt1.71□□□□□ -2.14
RRP40Q08285 ECM5YMR176W 4236 nt1.71□□□□□ -2.14
RRP40Q08285 RTT101YJL047C 2529 nt1.71□□□□□ -2.14
RRP40Q08285 GIM3YNL153C 390 nt1.71□□□□□ -2.14
RRP40Q08285 YOL159C-AYOL159C-A 273 nt1.71□□□□□ -2.14
RRP40Q08285 YHR050W-AYHR050W-A 171 nt1.7□□□□□ -2.14
RRP40Q08285 YLR255CYLR255C 354 nt1.7□□□□□ -2.14
RRP40Q08285 BUD2YKL092C 3315 nt1.7□□□□□ -2.14
RRP40Q08285 YLR422WYLR422W 5799 nt1.7□□□□□ -2.14
RRP40Q08285 REV3YPL167C 4515 nt1.69□□□□□ -2.14
RRP40Q08285 YNL144CYNL144C 2223 nt1.69□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms