Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YPR145C-AYPR145C-A 237 nt2.52□□□□□ -2.01
RPA49Q01080 YNL034WYNL034W 1839 nt2.52□□□□□ -2.01
RPA49Q01080 SRB8YCR081W 4284 nt2.51□□□□□ -2.01
RPA49Q01080 KSP1YHR082C 3090 nt2.51□□□□□ -2.01
RPA49Q01080 YDR209CYDR209C 414 nt2.51□□□□□ -2.01
RPA49Q01080 TSA2YDR453C 591 nt2.51□□□□□ -2.01
RPA49Q01080 MPO1YGL010W 525 nt2.51□□□□□ -2.01
RPA49Q01080 YGL015CYGL015C 393 nt2.51□□□□□ -2.01
RPA49Q01080 PSY1YKL076C 384 nt2.51□□□□□ -2.01
RPA49Q01080 YLR154W-EYLR154W-E 204 nt2.51□□□□□ -2.01
RPA49Q01080 AIM32YML050W 936 nt2.51□□□□□ -2.01
RPA49Q01080 SMY2YBR172C 2223 nt2.5□□□□□ -2.01
RPA49Q01080 YPR089WYPR089W 2667 nt2.5□□□□□ -2.01
RPA49Q01080 YDR210W-AYDR210W-A 1317 nt2.5□□□□□ -2.01
RPA49Q01080 YOR343W-AYOR343W-A 1317 nt2.5□□□□□ -2.01
RPA49Q01080 BET4YJL031C 984 nt2.5□□□□□ -2.01
RPA49Q01080 APQ13YJL075C 417 nt2.5□□□□□ -2.01
RPA49Q01080 YJL202CYJL202C 348 nt2.5□□□□□ -2.01
RPA49Q01080 VPH2YKL119C 648 nt2.5□□□□□ -2.01
RPA49Q01080 BET3YKR068C 582 nt2.5□□□□□ -2.01
RPA49Q01080 LSM2YBL026W 288 nt2.5□□□□□ -2.01
RPA49Q01080 YMR013C-AYMR013C-A 150 nt2.5□□□□□ -2.01
RPA49Q01080 SWS2YNL081C 432 nt2.5□□□□□ -2.01
RPA49Q01080 MPP6YNR024W 561 nt2.5□□□□□ -2.01
RPA49Q01080 YBR197CYBR197C 654 nt2.5□□□□□ -2.01
RPA49Q01080 NUP170YBL079W 4509 nt2.5□□□□□ -2.01
RPA49Q01080 TRA1YHR099W 11235 nt2.5□□□□□ -2.01
RPA49Q01080 APL5YPL195W 2799 nt2.49□□□□□ -2.01
RPA49Q01080 HOS4YIL112W 3252 nt2.49□□□□□ -2.01
RPA49Q01080 OSW7YFR039C 1533 nt2.49□□□□□ -2.01
RPA49Q01080 NFT1YKR103W 3657 nt2.49□□□□□ -2.01
RPA49Q01080 YGR293CYGR293C 462 nt2.49□□□□□ -2.01
RPA49Q01080 PRS3YHL011C 963 nt2.49□□□□□ -2.01
RPA49Q01080 SPO13YHR014W 876 nt2.49□□□□□ -2.01
RPA49Q01080 YIR020CYIR020C 303 nt2.49□□□□□ -2.01
RPA49Q01080 BUD19YJL188C 309 nt2.49□□□□□ -2.01
RPA49Q01080 YAL042C-AYAL042C-A 378 nt2.49□□□□□ -2.01
RPA49Q01080 AFB1YLR040C 675 nt2.49□□□□□ -2.01
RPA49Q01080 RPL36AYMR194W 303 nt2.49□□□□□ -2.01
RPA49Q01080 YPL080CYPL080C 327 nt2.49□□□□□ -2.01
RPA49Q01080 MEI5YPL121C 669 nt2.49□□□□□ -2.01
RPA49Q01080 YPR172WYPR172W 603 nt2.49□□□□□ -2.01
RPA49Q01080 SVL3YPL032C 2478 nt2.49□□□□□ -2.01
RPA49Q01080 SWA2YDR320C 2007 nt2.49□□□□□ -2.01
RPA49Q01080 PSO2YMR137C 1986 nt2.49□□□□□ -2.01
RPA49Q01080 SPR3YGR059W 1539 nt2.48□□□□□ -2.01
RPA49Q01080 TOP2YNL088W 4287 nt2.48□□□□□ -2.01
RPA49Q01080 HNT1YDL125C 477 nt2.48□□□□□ -2.01
RPA49Q01080 YGR050CYGR050C 357 nt2.48□□□□□ -2.01
RPA49Q01080 YJR141WYJR141W 1044 nt2.48□□□□□ -2.01
RPA49Q01080 ARV1YLR242C 966 nt2.48□□□□□ -2.01
RPA49Q01080 CSI1YMR025W 888 nt2.48□□□□□ -2.01
RPA49Q01080 LCL1YPL056C 306 nt2.48□□□□□ -2.01
RPA49Q01080 Q0017Q0017 162 nt2.48□□□□□ -2.01
RPA49Q01080 SUL1YBR294W 2580 nt2.48□□□□□ -2.01
RPA49Q01080 ECM25YJL201W 1800 nt2.47□□□□□ -2.01
RPA49Q01080 MET32YDR253C 576 nt2.47□□□□□ -2.01
RPA49Q01080 GPI8YDR331W 1236 nt2.47□□□□□ -2.01
RPA49Q01080 ILM1YJR118C 612 nt2.47□□□□□ -2.01
RPA49Q01080 BER1YLR412W 825 nt2.47□□□□□ -2.01
RPA49Q01080 YBL108WYBL108W 306 nt2.47□□□□□ -2.01
RPA49Q01080 TRM7YBR061C 933 nt2.47□□□□□ -2.01
RPA49Q01080 SNU114YKL173W 3027 nt2.47□□□□□ -2.01
RPA49Q01080 ISW1YBR245C 3390 nt2.47□□□□□ -2.01
RPA49Q01080 PES4YFR023W 1836 nt2.47□□□□□ -2.01
RPA49Q01080 YDR239CYDR239C 2364 nt2.46□□□□□ -2.01
RPA49Q01080 YER038W-AYER038W-A 381 nt2.46□□□□□ -2.02
RPA49Q01080 STE18YJR086W 333 nt2.46□□□□□ -2.02
RPA49Q01080 RPS29AYLR388W 171 nt2.46□□□□□ -2.02
RPA49Q01080 YNL018CYNL018C 1839 nt2.46□□□□□ -2.02
RPA49Q01080 PRP6YBR055C 2700 nt2.46□□□□□ -2.02
RPA49Q01080 YEF3YLR249W 3135 nt2.46□□□□□ -2.02
RPA49Q01080 YJL070CYJL070C 2667 nt2.45□□□□□ -2.02
RPA49Q01080 HRD3YLR207W 2502 nt2.45□□□□□ -2.02
RPA49Q01080 SSE1YPL106C 2082 nt2.45□□□□□ -2.02
RPA49Q01080 YDL016CYDL016C 303 nt2.45□□□□□ -2.02
RPA49Q01080 GET1YGL020C 708 nt2.45□□□□□ -2.02
RPA49Q01080 IST3YIR005W 447 nt2.45□□□□□ -2.02
RPA49Q01080 YNL146C-AYNL146C-A 195 nt2.45□□□□□ -2.02
RPA49Q01080 RCN2YOR220W 798 nt2.45□□□□□ -2.02
RPA49Q01080 YOR283WYOR283W 693 nt2.45□□□□□ -2.02
RPA49Q01080 LOA1YPR139C 903 nt2.45□□□□□ -2.02
RPA49Q01080 FAR11YNL127W 2862 nt2.45□□□□□ -2.02
RPA49Q01080 EDS1YBR033W 2760 nt2.44□□□□□ -2.02
RPA49Q01080 SAP190YKR028W 3102 nt2.44□□□□□ -2.02
RPA49Q01080 NDD1YOR372C 1665 nt2.44□□□□□ -2.02
RPA49Q01080 PSD2YGR170W 3417 nt2.44□□□□□ -2.02
RPA49Q01080 YCR108CYCR108C 192 nt2.44□□□□□ -2.02
RPA49Q01080 RTR2YDR066C 591 nt2.44□□□□□ -2.02
RPA49Q01080 YER119C-AYER119C-A 372 nt2.44□□□□□ -2.02
RPA49Q01080 AAD16YFL057C 459 nt2.44□□□□□ -2.02
RPA49Q01080 UBX4YMR067C 1251 nt2.44□□□□□ -2.02
RPA49Q01080 SAS2YMR127C 1017 nt2.44□□□□□ -2.02
RPA49Q01080 IGO1YNL157W 507 nt2.44□□□□□ -2.02
RPA49Q01080 SWM2YNR004W 441 nt2.44□□□□□ -2.02
RPA49Q01080 RPL25YOL127W 429 nt2.44□□□□□ -2.02
RPA49Q01080 YPL039WYPL039W 951 nt2.44□□□□□ -2.02
RPA49Q01080 YKR078WYKR078W 1758 nt2.44□□□□□ -2.02
RPA49Q01080 YKU80YMR106C 1890 nt2.43□□□□□ -2.02
RPA49Q01080 VTC1YER072W 390 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 75.8 ms