Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	TIM11	YDR322C-A	291 nt		3.17	□□□□□ -1.9
CAF16	P43569	RPS28B	YLR264W	204 nt		3.17	□□□□□ -1.9
CAF16	P43569	COX7	YMR256C	183 nt		3.17	□□□□□ -1.9
CAF16	P43569	YPL225W	YPL225W	441 nt		3.17	□□□□□ -1.9
CAF16	P43569	PKH1	YDR490C	2301 nt		3.17	□□□□□ -1.9
CAF16	P43569	PSK2	YOL045W	3306 nt		3.17	□□□□□ -1.9
CAF16	P43569	GYP7	YDL234C	2241 nt		3.16	□□□□□ -1.9
CAF16	P43569	YPK1	YKL126W	2043 nt		3.16	□□□□□ -1.9
CAF16	P43569	URA2	YJL130C	6645 nt		3.16	□□□□□ -1.9
CAF16	P43569	AAD3	YCR107W	1092 nt		3.16	□□□□□ -1.9
CAF16	P43569	IGO2	YHR132W-A	396 nt		3.16	□□□□□ -1.9
CAF16	P43569	HYR1	YIR037W	492 nt		3.16	□□□□□ -1.9
CAF16	P43569	YOR105W	YOR105W	327 nt		3.16	□□□□□ -1.9
CAF16	P43569	SOK1	YDR006C	2706 nt		3.16	□□□□□ -1.9
CAF16	P43569	CDC45	YLR103C	1953 nt		3.16	□□□□□ -1.9
CAF16	P43569	BRO1	YPL084W	2535 nt		3.16	□□□□□ -1.9
CAF16	P43569	ARO80	YDR421W	2853 nt		3.15	□□□□□ -1.9
CAF16	P43569	ECM25	YJL201W	1800 nt		3.15	□□□□□ -1.91
CAF16	P43569	YDR250C	YDR250C	276 nt		3.15	□□□□□ -1.91
CAF16	P43569	YER039C-A	YER039C-A	219 nt		3.15	□□□□□ -1.91
CAF16	P43569	YHR052W-A	YHR052W-A	195 nt		3.15	□□□□□ -1.91
CAF16	P43569	YHR054W-A	YHR054W-A	195 nt		3.15	□□□□□ -1.91
CAF16	P43569	URM1	YIL008W	300 nt		3.15	□□□□□ -1.91
CAF16	P43569	YLR154C-H	YLR154C-H	132 nt		3.15	□□□□□ -1.91
CAF16	P43569	YLR156C-A	YLR156C-A	132 nt		3.15	□□□□□ -1.91
CAF16	P43569	YLR157C-C	YLR157C-C	132 nt		3.15	□□□□□ -1.91
CAF16	P43569	YLR159C-A	YLR159C-A	132 nt		3.15	□□□□□ -1.91
CAF16	P43569	YMR193C-A	YMR193C-A	387 nt		3.15	□□□□□ -1.91
CAF16	P43569	EGD1	YPL037C	474 nt		3.15	□□□□□ -1.91
CAF16	P43569	MIT1	YEL007W	2001 nt		3.15	□□□□□ -1.91
CAF16	P43569	SSE1	YPL106C	2082 nt		3.15	□□□□□ -1.91
CAF16	P43569	YJL016W	YJL016W	1686 nt		3.14	□□□□□ -1.91
CAF16	P43569	PFK26	YIL107C	2484 nt		3.14	□□□□□ -1.91
CAF16	P43569	ITC1	YGL133W	3795 nt		3.14	□□□□□ -1.91
CAF16	P43569	YIL115W-A	YIL115W-A	372 nt		3.14	□□□□□ -1.91
CAF16	P43569	RPS22B	YLR367W	393 nt		3.14	□□□□□ -1.91
CAF16	P43569	VTI1	YMR197C	654 nt		3.14	□□□□□ -1.91
CAF16	P43569	GIS2	YNL255C	462 nt		3.14	□□□□□ -1.91
CAF16	P43569	ATP15	YPL271W	189 nt		3.14	□□□□□ -1.91
CAF16	P43569	VPS53	YJL029C	2469 nt		3.14	□□□□□ -1.91
CAF16	P43569	TPS2	YDR074W	2691 nt		3.14	□□□□□ -1.91
CAF16	P43569	TCP1	YDR212W	1680 nt		3.14	□□□□□ -1.91
CAF16	P43569	YJR003C	YJR003C	1560 nt		3.13	□□□□□ -1.91
CAF16	P43569	COX1	Q0045	1605 nt		3.13	□□□□□ -1.91
CAF16	P43569	AIM7	YDR063W	450 nt		3.13	□□□□□ -1.91
CAF16	P43569	RMT2	YDR465C	1239 nt		3.13	□□□□□ -1.91
CAF16	P43569	CAJ1	YER048C	1176 nt		3.13	□□□□□ -1.91
CAF16	P43569	AST2	YER101C	1293 nt		3.13	□□□□□ -1.91
CAF16	P43569	YER189W	YER189W	369 nt		3.13	□□□□□ -1.91
CAF16	P43569	tL(UAG)J	tL(UAG)J	82 nt		3.13	□□□□□ -1.91
CAF16	P43569	tL(UAG)L1	tL(UAG)L1	82 nt		3.13	□□□□□ -1.91
CAF16	P43569	tL(UAG)L2	tL(UAG)L2	82 nt		3.13	□□□□□ -1.91
CAF16	P43569	DLS1	YJL065C	504 nt		3.13	□□□□□ -1.91
CAF16	P43569	NCE101	YJL205C	162 nt		3.13	□□□□□ -1.91
CAF16	P43569	ABM1	YJR108W	372 nt		3.13	□□□□□ -1.91
CAF16	P43569	COQ10	YOL008W	624 nt		3.13	□□□□□ -1.91
CAF16	P43569	YPL238C	YPL238C	390 nt		3.13	□□□□□ -1.91
CAF16	P43569	NUP82	YJL061W	2142 nt		3.13	□□□□□ -1.91
CAF16	P43569	RRP5	YMR229C	5190 nt		3.12	□□□□□ -1.91
CAF16	P43569	CDC50	YCR094W	1176 nt		3.12	□□□□□ -1.91
CAF16	P43569	YIL054W	YIL054W	318 nt		3.12	□□□□□ -1.91
CAF16	P43569	MRPL31	YKL138C	396 nt		3.12	□□□□□ -1.91
CAF16	P43569	YPR108W-A	YPR108W-A	213 nt		3.12	□□□□□ -1.91
CAF16	P43569	PUF4	YGL014W	2667 nt		3.12	□□□□□ -1.91
CAF16	P43569	DSE4	YNR067C	3354 nt		3.12	□□□□□ -1.91
CAF16	P43569	VAS1	YGR094W	3315 nt		3.11	□□□□□ -1.91
CAF16	P43569	YER181C	YER181C	324 nt		3.11	□□□□□ -1.91
CAF16	P43569	GPI14	YJR013W	1212 nt		3.11	□□□□□ -1.91
CAF16	P43569	YKL033W-A	YKL033W-A	711 nt		3.11	□□□□□ -1.91
CAF16	P43569	YKL118W	YKL118W	312 nt		3.11	□□□□□ -1.91
CAF16	P43569	RPS21A	YKR057W	264 nt		3.11	□□□□□ -1.91
CAF16	P43569	YBL108W	YBL108W	306 nt		3.11	□□□□□ -1.91
CAF16	P43569	NET1	YJL076W	3570 nt		3.11	□□□□□ -1.91
CAF16	P43569	RPN1	YHR027C	2982 nt		3.11	□□□□□ -1.91
CAF16	P43569	VTC4	YJL012C	2166 nt		3.11	□□□□□ -1.91
CAF16	P43569	VPS52	YDR484W	1926 nt		3.11	□□□□□ -1.91
CAF16	P43569	PSY2	YNL201C	2577 nt		3.1	□□□□□ -1.91
CAF16	P43569	PSK1	YAL017W	4071 nt		3.1	□□□□□ -1.91
CAF16	P43569	BAS1	YKR099W	2436 nt		3.1	□□□□□ -1.91
CAF16	P43569	NPR3	YHL023C	3441 nt		3.1	□□□□□ -1.91
CAF16	P43569	RCY1	YJL204C	2523 nt		3.1	□□□□□ -1.91
CAF16	P43569	PRE8	YML092C	753 nt		3.1	□□□□□ -1.91
CAF16	P43569	MGR1	YCL044C	1254 nt		3.1	□□□□□ -1.91
CAF16	P43569	PSO2	YMR137C	1986 nt		3.1	□□□□□ -1.91
CAF16	P43569	YMR317W	YMR317W	3423 nt		3.1	□□□□□ -1.91
CAF16	P43569	SKT5	YBL061C	2091 nt		3.1	□□□□□ -1.91
CAF16	P43569	YJL181W	YJL181W	1836 nt		3.09	□□□□□ -1.91
CAF16	P43569	LCL2	YLR104W	396 nt		3.09	□□□□□ -1.91
CAF16	P43569	TRM7	YBR061C	933 nt		3.09	□□□□□ -1.91
CAF16	P43569	MAK21	YDR060W	3078 nt		3.09	□□□□□ -1.91
CAF16	P43569	POL2	YNL262W	6669 nt		3.09	□□□□□ -1.92
CAF16	P43569	MSS11	YMR164C	2277 nt		3.08	□□□□□ -1.92
CAF16	P43569	YDR008C	YDR008C	351 nt		3.08	□□□□□ -1.92
CAF16	P43569	YLR458W	YLR458W	381 nt		3.08	□□□□□ -1.92
CAF16	P43569	ROM1	YGR070W	3468 nt		3.07	□□□□□ -1.92
CAF16	P43569	SNT1	YCR033W	3681 nt		3.07	□□□□□ -1.92
CAF16	P43569	TAF2	YCR042C	4224 nt		3.07	□□□□□ -1.92
CAF16	P43569	YDL041W	YDL041W	354 nt		3.07	□□□□□ -1.92
CAF16	P43569	AAD16	YFL057C	459 nt		3.07	□□□□□ -1.92
CAF16	P43569	YAF9	YNL107W	681 nt		3.07	□□□□□ -1.92

Retrieved 100 of 7,029 protein–RNA pairs in 61.3 ms