Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 DPB11YJL090C 2295 nt3.28□□□□□ -1.88
UBP12P39538 UBP14YBR058C 2346 nt3.27□□□□□ -1.89
UBP12P39538 NAB3YPL190C 2409 nt3.27□□□□□ -1.89
UBP12P39538 tW(CCA)G1tW(CCA)G1 72 nt3.27□□□□□ -1.89
UBP12P39538 tW(CCA)G2tW(CCA)G2 72 nt3.27□□□□□ -1.89
UBP12P39538 tW(CCA)JtW(CCA)J 72 nt3.27□□□□□ -1.89
UBP12P39538 tW(CCA)KtW(CCA)K 72 nt3.27□□□□□ -1.89
UBP12P39538 tW(CCA)MtW(CCA)M 72 nt3.27□□□□□ -1.89
UBP12P39538 tW(CCA)PtW(CCA)P 72 nt3.27□□□□□ -1.89
UBP12P39538 SSN2YDR443C 4263 nt3.27□□□□□ -1.89
UBP12P39538 GCD10YNL062C 1437 nt3.27□□□□□ -1.89
UBP12P39538 YGR042WYGR042W 816 nt3.26□□□□□ -1.89
UBP12P39538 NOP19YGR251W 591 nt3.26□□□□□ -1.89
UBP12P39538 CMS1YLR003C 876 nt3.26□□□□□ -1.89
UBP12P39538 RRT1YBL048W 312 nt3.26□□□□□ -1.89
UBP12P39538 YPL197CYPL197C 414 nt3.26□□□□□ -1.89
UBP12P39538 NDD1YOR372C 1665 nt3.26□□□□□ -1.89
UBP12P39538 NDT80YHR124W 1884 nt3.26□□□□□ -1.89
UBP12P39538 AYT1YLL063C 1425 nt3.26□□□□□ -1.89
UBP12P39538 TPS2YDR074W 2691 nt3.26□□□□□ -1.89
UBP12P39538 RSN1YMR266W 2862 nt3.25□□□□□ -1.89
UBP12P39538 HPA3YEL066W 540 nt3.25□□□□□ -1.89
UBP12P39538 YER084W-AYER084W-A 513 nt3.25□□□□□ -1.89
UBP12P39538 GLC7YER133W 939 nt3.25□□□□□ -1.89
UBP12P39538 YGR121W-AYGR121W-A 216 nt3.25□□□□□ -1.89
UBP12P39538 YIL030W-AYIL030W-A 339 nt3.25□□□□□ -1.89
UBP12P39538 PHD1YKL043W 1101 nt3.25□□□□□ -1.89
UBP12P39538 YML108WYML108W 318 nt3.25□□□□□ -1.89
UBP12P39538 RPB11YOL005C 363 nt3.25□□□□□ -1.89
UBP12P39538 IRC16YPR038W 360 nt3.25□□□□□ -1.89
UBP12P39538 snR41snR41 95 nt3.25□□□□□ -1.89
UBP12P39538 ECM25YJL201W 1800 nt3.25□□□□□ -1.89
UBP12P39538 FRE2YKL220C 2136 nt3.25□□□□□ -1.89
UBP12P39538 FIR1YER032W 2631 nt3.24□□□□□ -1.89
UBP12P39538 MDM32YOR147W 1869 nt3.24□□□□□ -1.89
UBP12P39538 YPS5YGL259W 498 nt3.24□□□□□ -1.89
UBP12P39538 TOM22YNL131W 459 nt3.24□□□□□ -1.89
UBP12P39538 YOL134CYOL134C 390 nt3.24□□□□□ -1.89
UBP12P39538 snR54snR54 86 nt3.24□□□□□ -1.89
UBP12P39538 TFC4YGR047C 3078 nt3.24□□□□□ -1.89
UBP12P39538 PPN1YDR452W 2025 nt3.24□□□□□ -1.89
UBP12P39538 YKR078WYKR078W 1758 nt3.23□□□□□ -1.89
UBP12P39538 YHR125WYHR125W 306 nt3.23□□□□□ -1.89
UBP12P39538 YIL058WYIL058W 285 nt3.23□□□□□ -1.89
UBP12P39538 TPM2YIL138C 486 nt3.23□□□□□ -1.89
UBP12P39538 BUD4YJR092W 4344 nt3.23□□□□□ -1.89
UBP12P39538 snR70snR70 164 nt3.22□□□□□ -1.89
UBP12P39538 RNR4YGR180C 1038 nt3.22□□□□□ -1.89
UBP12P39538 RGM1YMR182C 636 nt3.22□□□□□ -1.89
UBP12P39538 SWM2YNR004W 441 nt3.22□□□□□ -1.89
UBP12P39538 YGR067CYGR067C 2415 nt3.21□□□□□ -1.9
UBP12P39538 ROY1YMR258C 1662 nt3.21□□□□□ -1.9
UBP12P39538 YHR214C-CYHR214C-C 1437 nt3.21□□□□□ -1.9
UBP12P39538 GPI8YDR331W 1236 nt3.21□□□□□ -1.9
UBP12P39538 FPR1YNL135C 345 nt3.21□□□□□ -1.9
UBP12P39538 CRS5YOR031W 210 nt3.21□□□□□ -1.9
UBP12P39538 DGK1YOR311C 873 nt3.21□□□□□ -1.9
UBP12P39538 SSY1YDR160W 2559 nt3.21□□□□□ -1.9
UBP12P39538 GDS1YOR355W 1569 nt3.21□□□□□ -1.9
UBP12P39538 YBR012W-AYBR012W-A 1323 nt3.2□□□□□ -1.9
UBP12P39538 YOR142W-AYOR142W-A 1323 nt3.2□□□□□ -1.9
UBP12P39538 YPR158W-AYPR158W-A 1323 nt3.2□□□□□ -1.9
UBP12P39538 PSO2YMR137C 1986 nt3.2□□□□□ -1.9
UBP12P39538 CAJ1YER048C 1176 nt3.2□□□□□ -1.9
UBP12P39538 AIM29YKR074W 468 nt3.2□□□□□ -1.9
UBP12P39538 URA10YMR271C 684 nt3.2□□□□□ -1.9
UBP12P39538 PRM3YPL192C 402 nt3.2□□□□□ -1.9
UBP12P39538 RPB5YBR154C 648 nt3.2□□□□□ -1.9
UBP12P39538 YBR197CYBR197C 654 nt3.2□□□□□ -1.9
UBP12P39538 MUD2YKL074C 1584 nt3.2□□□□□ -1.9
UBP12P39538 SSE1YPL106C 2082 nt3.2□□□□□ -1.9
UBP12P39538 SPE1YKL184W 1401 nt3.19□□□□□ -1.9
UBP12P39538 HMLALPHA2YCL067C 633 nt3.19□□□□□ -1.9
UBP12P39538 MATALPHA2YCR039C 633 nt3.19□□□□□ -1.9
UBP12P39538 PEP8YJL053W 1140 nt3.19□□□□□ -1.9
UBP12P39538 YMR153C-AYMR153C-A 336 nt3.19□□□□□ -1.9
UBP12P39538 snR43snR43 209 nt3.19□□□□□ -1.9
UBP12P39538 YKL111CYKL111C 336 nt3.18□□□□□ -1.9
UBP12P39538 RNP1YLL046C 750 nt3.18□□□□□ -1.9
UBP12P39538 FYV12YOR183W 390 nt3.18□□□□□ -1.9
UBP12P39538 AXL1YPR122W 3627 nt3.18□□□□□ -1.9
UBP12P39538 DYN1YKR054C 12279 nt3.17□□□□□ -1.9
UBP12P39538 YER006C-AYER006C-A 318 nt3.17□□□□□ -1.9
UBP12P39538 YHR032W-AYHR032W-A 180 nt3.17□□□□□ -1.9
UBP12P39538 HYR1YIR037W 492 nt3.17□□□□□ -1.9
UBP12P39538 RPS22AYJL190C 393 nt3.17□□□□□ -1.9
UBP12P39538 YJR140W-AYJR140W-A 150 nt3.17□□□□□ -1.9
UBP12P39538 LCL2YLR104W 396 nt3.17□□□□□ -1.9
UBP12P39538 SIP18YMR175W 240 nt3.17□□□□□ -1.9
UBP12P39538 IGO1YNL157W 507 nt3.17□□□□□ -1.9
UBP12P39538 COQ10YOL008W 624 nt3.17□□□□□ -1.9
UBP12P39538 TRM7YBR061C 933 nt3.17□□□□□ -1.9
UBP12P39538 NFT1YKR103W 3657 nt3.17□□□□□ -1.9
UBP12P39538 YLR278CYLR278C 4026 nt3.16□□□□□ -1.9
UBP12P39538 JSN1YJR091C 3276 nt3.16□□□□□ -1.9
UBP12P39538 BCK1YJL095W 4437 nt3.16□□□□□ -1.9
UBP12P39538 YCR064CYCR064C 411 nt3.16□□□□□ -1.9
UBP12P39538 GET1YGL020C 708 nt3.16□□□□□ -1.9
UBP12P39538 BUD21YOR078W 645 nt3.16□□□□□ -1.9
UBP12P39538 YPR145C-AYPR145C-A 237 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 87.2 ms