Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PPARGC1BQ86YN6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PPARGC1BQ86YN6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PPARGC1BQ86YN6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC32.41■■■□□ 2.78
PPARGC1BQ86YN6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PPARGC1BQ86YN6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC32.41■■■□□ 2.78
PPARGC1BQ86YN6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PPARGC1BQ86YN6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 LINC01006-201ENST00000333319 2292 ntBASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC32.4■■■□□ 2.78
PPARGC1BQ86YN6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 AL137784.2-201ENST00000607332 1000 ntBASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PPARGC1BQ86YN6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
PPARGC1BQ86YN6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC32.38■■■□□ 2.77
PPARGC1BQ86YN6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
PPARGC1BQ86YN6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC32.38■■■□□ 2.77
PPARGC1BQ86YN6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC32.38■■■□□ 2.77
PPARGC1BQ86YN6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PPARGC1BQ86YN6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC32.38■■■□□ 2.77
PPARGC1BQ86YN6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC32.37■■■□□ 2.77
PPARGC1BQ86YN6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 LINC01521-201ENST00000504184 1943 ntBASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
PPARGC1BQ86YN6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC32.35■■■□□ 2.77
PPARGC1BQ86YN6 KRT16P2-201ENST00000414673 1423 ntBASIC32.35■■■□□ 2.77
PPARGC1BQ86YN6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
PPARGC1BQ86YN6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PPARGC1BQ86YN6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
PPARGC1BQ86YN6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
PPARGC1BQ86YN6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 RBM17P2-201ENST00000616397 1405 ntBASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 KRT18P20-201ENST00000548986 1279 ntBASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 DUX4L16-201ENST00000555130 1264 ntBASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PPARGC1BQ86YN6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 AC010536.3-201ENST00000620306 533 ntBASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
PPARGC1BQ86YN6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
PPARGC1BQ86YN6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PPARGC1BQ86YN6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PPARGC1BQ86YN6 AC120498.10-201ENST00000621827 505 ntBASIC32.32■■■□□ 2.76
PPARGC1BQ86YN6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
PPARGC1BQ86YN6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms