Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YDR366CYDR366C 399 nt3.55□□□□□ -1.84
HDA1P53973 RRT13YER066W 558 nt3.55□□□□□ -1.84
HDA1P53973 YHR052W-AYHR052W-A 195 nt3.55□□□□□ -1.84
HDA1P53973 YHR054W-AYHR054W-A 195 nt3.55□□□□□ -1.84
HDA1P53973 PFY1YOR122C 381 nt3.55□□□□□ -1.84
HDA1P53973 SLP1YOR154W 1764 nt3.55□□□□□ -1.84
HDA1P53973 ARG2YJL071W 1725 nt3.55□□□□□ -1.84
HDA1P53973 NIC96YFR002W 2520 nt3.54□□□□□ -1.84
HDA1P53973 TMA108YIL137C 2841 nt3.54□□□□□ -1.84
HDA1P53973 YDL152WYDL152W 366 nt3.54□□□□□ -1.84
HDA1P53973 YHR214W-AYHR214W-A 486 nt3.54□□□□□ -1.84
HDA1P53973 YLR012CYLR012C 300 nt3.54□□□□□ -1.84
HDA1P53973 YAR068WYAR068W 486 nt3.54□□□□□ -1.84
HDA1P53973 YPR053CYPR053C 456 nt3.54□□□□□ -1.84
HDA1P53973 AUS1YOR011W 4185 nt3.54□□□□□ -1.84
HDA1P53973 KIN82YCR091W 2163 nt3.53□□□□□ -1.84
HDA1P53973 SPT16YGL207W 3108 nt3.53□□□□□ -1.84
HDA1P53973 STE23YLR389C 3084 nt3.53□□□□□ -1.84
HDA1P53973 NMD2YHR077C 3270 nt3.53□□□□□ -1.84
HDA1P53973 MRH1YDR033W 963 nt3.53□□□□□ -1.84
HDA1P53973 YHL037CYHL037C 402 nt3.53□□□□□ -1.84
HDA1P53973 TVP18YMR071C 504 nt3.53□□□□□ -1.84
HDA1P53973 YOR192C-CYOR192C-C 237 nt3.53□□□□□ -1.84
HDA1P53973 DGK1YOR311C 873 nt3.53□□□□□ -1.84
HDA1P53973 NTO1YPR031W 2247 nt3.53□□□□□ -1.84
HDA1P53973 ATP25YMR098C 1839 nt3.53□□□□□ -1.84
HDA1P53973 21S_rRNA21S_rRNA 3296 nt3.52□□□□□ -1.85
HDA1P53973 STE6YKL209C 3873 nt3.52□□□□□ -1.85
HDA1P53973 XRS2YDR369C 2565 nt3.52□□□□□ -1.85
HDA1P53973 ERG28YER044C 447 nt3.52□□□□□ -1.85
HDA1P53973 RPL29YFR032C-A 180 nt3.52□□□□□ -1.85
HDA1P53973 RPL1BYGL135W 654 nt3.52□□□□□ -1.85
HDA1P53973 FYV4YHR059W 393 nt3.52□□□□□ -1.85
HDA1P53973 MRPL31YKL138C 396 nt3.52□□□□□ -1.85
HDA1P53973 COA4YLR218C 453 nt3.52□□□□□ -1.85
HDA1P53973 MRPL50YNR022C 420 nt3.52□□□□□ -1.85
HDA1P53973 RPL1AYPL220W 654 nt3.52□□□□□ -1.85
HDA1P53973 YJR030CYJR030C 2238 nt3.52□□□□□ -1.85
HDA1P53973 ATP22YDR350C 2055 nt3.51□□□□□ -1.85
HDA1P53973 KHA1YJL094C 2622 nt3.51□□□□□ -1.85
HDA1P53973 ZDS2YML109W 2829 nt3.51□□□□□ -1.85
HDA1P53973 YDL068WYDL068W 330 nt3.51□□□□□ -1.85
HDA1P53973 ATP17YDR377W 306 nt3.51□□□□□ -1.85
HDA1P53973 YEL032C-AYEL032C-A 162 nt3.51□□□□□ -1.85
HDA1P53973 LSM2YBL026W 288 nt3.51□□□□□ -1.85
HDA1P53973 RPL23AYBL087C 414 nt3.51□□□□□ -1.85
HDA1P53973 YOR282WYOR282W 321 nt3.51□□□□□ -1.85
HDA1P53973 YOR385WYOR385W 873 nt3.51□□□□□ -1.85
HDA1P53973 YDL180WYDL180W 1644 nt3.51□□□□□ -1.85
HDA1P53973 CIN1YOR349W 3045 nt3.51□□□□□ -1.85
HDA1P53973 YGR025WYGR025W 303 nt3.5□□□□□ -1.85
HDA1P53973 SRL3YKR091W 741 nt3.5□□□□□ -1.85
HDA1P53973 RPL37AYLR185W 267 nt3.5□□□□□ -1.85
HDA1P53973 YAF9YNL107W 681 nt3.5□□□□□ -1.85
HDA1P53973 URB2YJR041C 3525 nt3.5□□□□□ -1.85
HDA1P53973 DIE2YGR227W 1578 nt3.5□□□□□ -1.85
HDA1P53973 CCM1YGR150C 2595 nt3.5□□□□□ -1.85
HDA1P53973 HEH2YDR458C 1992 nt3.49□□□□□ -1.85
HDA1P53973 ARK1YNL020C 1917 nt3.49□□□□□ -1.85
HDA1P53973 YEL057CYEL057C 702 nt3.49□□□□□ -1.85
HDA1P53973 RAD6YGL058W 519 nt3.49□□□□□ -1.85
HDA1P53973 UBC7YMR022W 498 nt3.49□□□□□ -1.85
HDA1P53973 VTI1YMR197C 654 nt3.49□□□□□ -1.85
HDA1P53973 YNL043CYNL043C 321 nt3.49□□□□□ -1.85
HDA1P53973 snR13snR13 124 nt3.49□□□□□ -1.85
HDA1P53973 SLM6YBR266C 453 nt3.49□□□□□ -1.85
HDA1P53973 MED1YPR070W 1701 nt3.49□□□□□ -1.85
HDA1P53973 SEC15YGL233W 2733 nt3.49□□□□□ -1.85
HDA1P53973 MKT1YNL085W 2493 nt3.48□□□□□ -1.85
HDA1P53973 HFM1YGL251C 3564 nt3.48□□□□□ -1.85
HDA1P53973 NHP2YDL208W 471 nt3.48□□□□□ -1.85
HDA1P53973 YDR413CYDR413C 576 nt3.48□□□□□ -1.85
HDA1P53973 YIL012WYIL012W 342 nt3.48□□□□□ -1.85
HDA1P53973 YKL033W-AYKL033W-A 711 nt3.48□□□□□ -1.85
HDA1P53973 JIP3YLR331C 378 nt3.48□□□□□ -1.85
HDA1P53973 SWT1YOR166C 1377 nt3.48□□□□□ -1.85
HDA1P53973 TOP1YOL006C 2310 nt3.48□□□□□ -1.85
HDA1P53973 SPA2YLL021W 4401 nt3.47□□□□□ -1.85
HDA1P53973 SIZ1YDR409W 2715 nt3.47□□□□□ -1.85
HDA1P53973 YOR296WYOR296W 3870 nt3.47□□□□□ -1.85
HDA1P53973 GYL1YMR192W 2163 nt3.47□□□□□ -1.85
HDA1P53973 YJR023CYJR023C 402 nt3.47□□□□□ -1.85
HDA1P53973 HEM4YOR278W 828 nt3.47□□□□□ -1.85
HDA1P53973 NSL1YPL233W 651 nt3.47□□□□□ -1.85
HDA1P53973 YKL100CYKL100C 1764 nt3.47□□□□□ -1.85
HDA1P53973 PWP2YCR057C 2772 nt3.47□□□□□ -1.85
HDA1P53973 BMS1YPL217C 3552 nt3.47□□□□□ -1.85
HDA1P53973 YJR003CYJR003C 1560 nt3.46□□□□□ -1.85
HDA1P53973 BYE1YKL005C 1785 nt3.46□□□□□ -1.86
HDA1P53973 TIF35YDR429C 825 nt3.46□□□□□ -1.86
HDA1P53973 YIR040CYIR040C 333 nt3.46□□□□□ -1.86
HDA1P53973 YJL222W-BYJL222W-B 138 nt3.46□□□□□ -1.86
HDA1P53973 YAR053WYAR053W 297 nt3.46□□□□□ -1.86
HDA1P53973 CWC22YGR278W 1734 nt3.46□□□□□ -1.86
HDA1P53973 YSW1YBR148W 1830 nt3.46□□□□□ -1.86
HDA1P53973 HMF1YER057C 390 nt3.45□□□□□ -1.86
HDA1P53973 RPB9YGL070C 369 nt3.45□□□□□ -1.86
HDA1P53973 NOP19YGR251W 591 nt3.45□□□□□ -1.86
HDA1P53973 YHR139C-AYHR139C-A 312 nt3.45□□□□□ -1.86
HDA1P53973 YIL054WYIL054W 318 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms