Protein–RNA interactions for Protein: P25594

VBA3, Vacuolar basic amino acid transporter 3, yeastyeast

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA3P25594 YHR214W-AYHR214W-A 486 nt3.39□□□□□ -1.87
VBA3P25594 YAL026C-AYAL026C-A 438 nt3.39□□□□□ -1.87
VBA3P25594 YJR023CYJR023C 402 nt3.39□□□□□ -1.87
VBA3P25594 YAR068WYAR068W 486 nt3.39□□□□□ -1.87
VBA3P25594 YOL159C-AYOL159C-A 273 nt3.39□□□□□ -1.87
VBA3P25594 ERP4YOR016C 624 nt3.39□□□□□ -1.87
VBA3P25594 RPL20BYOR312C 519 nt3.39□□□□□ -1.87
VBA3P25594 NSL1YPL233W 651 nt3.39□□□□□ -1.87
VBA3P25594 SLM6YBR266C 453 nt3.39□□□□□ -1.87
VBA3P25594 PDC2YDR081C 2778 nt3.39□□□□□ -1.87
VBA3P25594 EXO84YBR102C 2262 nt3.39□□□□□ -1.87
VBA3P25594 YGR027W-BYGR027W-B 5268 nt3.38□□□□□ -1.87
VBA3P25594 YLR227W-BYLR227W-B 5268 nt3.38□□□□□ -1.87
VBA3P25594 YPR158C-DYPR158C-D 5268 nt3.38□□□□□ -1.87
VBA3P25594 SEN54YPL083C 1404 nt3.38□□□□□ -1.87
VBA3P25594 tC(GCA)BtC(GCA)B 72 nt3.38□□□□□ -1.87
VBA3P25594 tC(GCA)GtC(GCA)G 72 nt3.38□□□□□ -1.87
VBA3P25594 tC(GCA)P1tC(GCA)P1 72 nt3.38□□□□□ -1.87
VBA3P25594 tC(GCA)P2tC(GCA)P2 72 nt3.38□□□□□ -1.87
VBA3P25594 YDR431WYDR431W 312 nt3.38□□□□□ -1.87
VBA3P25594 IRC4YDR540C 540 nt3.38□□□□□ -1.87
VBA3P25594 YEL018C-AYEL018C-A 534 nt3.38□□□□□ -1.87
VBA3P25594 RPS20YHL015W 366 nt3.38□□□□□ -1.87
VBA3P25594 HIT1YJR055W 495 nt3.38□□□□□ -1.87
VBA3P25594 CDC33YOL139C 642 nt3.38□□□□□ -1.87
VBA3P25594 YPL185WYPL185W 396 nt3.38□□□□□ -1.87
VBA3P25594 YPR014CYPR014C 330 nt3.38□□□□□ -1.87
VBA3P25594 PKH1YDR490C 2301 nt3.38□□□□□ -1.87
VBA3P25594 XRS2YDR369C 2565 nt3.37□□□□□ -1.87
VBA3P25594 NPR1YNL183C 2373 nt3.37□□□□□ -1.87
VBA3P25594 MRH1YDR033W 963 nt3.37□□□□□ -1.87
VBA3P25594 YMR31YFR049W 372 nt3.37□□□□□ -1.87
VBA3P25594 YNL043CYNL043C 321 nt3.37□□□□□ -1.87
VBA3P25594 YPR197CYPR197C 564 nt3.37□□□□□ -1.87
VBA3P25594 AUS1YOR011W 4185 nt3.37□□□□□ -1.87
VBA3P25594 BOI1YBL085W 2943 nt3.37□□□□□ -1.87
VBA3P25594 YLR352WYLR352W 2424 nt3.36□□□□□ -1.87
VBA3P25594 CHA4YLR098C 1947 nt3.36□□□□□ -1.87
VBA3P25594 MED1YPR070W 1701 nt3.36□□□□□ -1.87
VBA3P25594 RIX1YHR197W 2292 nt3.36□□□□□ -1.87
VBA3P25594 PRP22YER013W 3438 nt3.36□□□□□ -1.87
VBA3P25594 FAP7YDL166C 594 nt3.36□□□□□ -1.87
VBA3P25594 ATP17YDR377W 306 nt3.36□□□□□ -1.87
VBA3P25594 YMR294W-AYMR294W-A 360 nt3.36□□□□□ -1.87
VBA3P25594 ZEO1YOL109W 342 nt3.36□□□□□ -1.87
VBA3P25594 snR42snR42 351 nt3.36□□□□□ -1.87
VBA3P25594 DNM1YLL001W 2274 nt3.36□□□□□ -1.87
VBA3P25594 ROY1YMR258C 1662 nt3.36□□□□□ -1.87
VBA3P25594 NDT80YHR124W 1884 nt3.35□□□□□ -1.87
VBA3P25594 SDH7YDR511W 402 nt3.35□□□□□ -1.87
VBA3P25594 RTT102YGR275W 474 nt3.35□□□□□ -1.87
VBA3P25594 YJR140W-AYJR140W-A 150 nt3.35□□□□□ -1.87
VBA3P25594 snR13snR13 124 nt3.35□□□□□ -1.87
VBA3P25594 YOR385WYOR385W 873 nt3.35□□□□□ -1.87
VBA3P25594 MET10YFR030W 3108 nt3.35□□□□□ -1.87
VBA3P25594 FAR1YJL157C 2493 nt3.35□□□□□ -1.87
VBA3P25594 IKI3YLR384C 4050 nt3.35□□□□□ -1.87
VBA3P25594 YMR317WYMR317W 3423 nt3.35□□□□□ -1.87
VBA3P25594 IOC3YFR013W 2364 nt3.34□□□□□ -1.87
VBA3P25594 FUS1YCL027W 1539 nt3.34□□□□□ -1.87
VBA3P25594 NIC96YFR002W 2520 nt3.34□□□□□ -1.87
VBA3P25594 CDH1YGL003C 1701 nt3.34□□□□□ -1.87
VBA3P25594 URA10YMR271C 684 nt3.34□□□□□ -1.87
VBA3P25594 YSY6YBR162W-A 198 nt3.34□□□□□ -1.87
VBA3P25594 COG3YER157W 2406 nt3.34□□□□□ -1.87
VBA3P25594 ARO1YDR127W 4767 nt3.34□□□□□ -1.88
VBA3P25594 SMC3YJL074C 3693 nt3.33□□□□□ -1.88
VBA3P25594 STE6YKL209C 3873 nt3.33□□□□□ -1.88
VBA3P25594 YGR025WYGR025W 303 nt3.33□□□□□ -1.88
VBA3P25594 MRP8YKL142W 660 nt3.33□□□□□ -1.88
VBA3P25594 PEP12YOR036W 867 nt3.33□□□□□ -1.88
VBA3P25594 HEF3YNL014W 3135 nt3.33□□□□□ -1.88
VBA3P25594 ENA5YDR038C 3276 nt3.33□□□□□ -1.88
VBA3P25594 ENA2YDR039C 3276 nt3.33□□□□□ -1.88
VBA3P25594 ENA1YDR040C 3276 nt3.33□□□□□ -1.88
VBA3P25594 GNT1YOR320C 1476 nt3.33□□□□□ -1.88
VBA3P25594 KAP95YLR347C 2586 nt3.33□□□□□ -1.88
VBA3P25594 tF(GAA)DtF(GAA)D 73 nt3.32□□□□□ -1.88
VBA3P25594 tF(GAA)NtF(GAA)N 73 nt3.32□□□□□ -1.88
VBA3P25594 RPS17BYDR447C 411 nt3.32□□□□□ -1.88
VBA3P25594 NOP19YGR251W 591 nt3.32□□□□□ -1.88
VBA3P25594 RPS24BYIL069C 408 nt3.32□□□□□ -1.88
VBA3P25594 RPS21BYJL136C 264 nt3.32□□□□□ -1.88
VBA3P25594 YKL111CYKL111C 336 nt3.32□□□□□ -1.88
VBA3P25594 YOR199WYOR199W 330 nt3.32□□□□□ -1.88
VBA3P25594 PSK1YAL017W 4071 nt3.32□□□□□ -1.88
VBA3P25594 SEA4YBL104C 3117 nt3.31□□□□□ -1.88
VBA3P25594 YOL057WYOL057W 2136 nt3.31□□□□□ -1.88
VBA3P25594 STU1YBL034C 4542 nt3.31□□□□□ -1.88
VBA3P25594 HPA3YEL066W 540 nt3.31□□□□□ -1.88
VBA3P25594 FYV4YHR059W 393 nt3.31□□□□□ -1.88
VBA3P25594 PEP8YJL053W 1140 nt3.31□□□□□ -1.88
VBA3P25594 YMR193C-AYMR193C-A 387 nt3.31□□□□□ -1.88
VBA3P25594 GIS2YNL255C 462 nt3.31□□□□□ -1.88
VBA3P25594 YPL276WYPL276W 438 nt3.31□□□□□ -1.88
VBA3P25594 YPR039WYPR039W 336 nt3.31□□□□□ -1.88
VBA3P25594 YHR080CYHR080C 4038 nt3.31□□□□□ -1.88
VBA3P25594 STE23YLR389C 3084 nt3.3□□□□□ -1.88
VBA3P25594 RLF2YPR018W 1821 nt3.3□□□□□ -1.88
VBA3P25594 CIN8YEL061C 3003 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms