Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 tT(AGU)O2tT(AGU)O2 73 nt1.22□□□□□ -2.21
TY1B-PR2P0C2J0 YIP3YNL044W 531 nt1.22□□□□□ -2.21
TY1B-PR2P0C2J0 YOR218CYOR218C 420 nt1.22□□□□□ -2.21
TY1B-PR2P0C2J0 YPL073CYPL073C 486 nt1.22□□□□□ -2.21
TY1B-PR2P0C2J0 RSM22YKL155C 1887 nt1.22□□□□□ -2.21
TY1B-PR2P0C2J0 VAM6YDL077C 3150 nt1.21□□□□□ -2.22
TY1B-PR2P0C2J0 CDC10YCR002C 969 nt1.21□□□□□ -2.22
TY1B-PR2P0C2J0 CMC4YMR194C-B 222 nt1.21□□□□□ -2.22
TY1B-PR2P0C2J0 FIG2YCR089W 4830 nt1.21□□□□□ -2.22
TY1B-PR2P0C2J0 TBS1YBR150C 3285 nt1.21□□□□□ -2.22
TY1B-PR2P0C2J0 YCL068CYCL068C 783 nt1.21□□□□□ -2.22
TY1B-PR2P0C2J0 RSR1YGR152C 819 nt1.21□□□□□ -2.22
TY1B-PR2P0C2J0 THO2YNL139C 4794 nt1.2□□□□□ -2.22
TY1B-PR2P0C2J0 RIT1YMR283C 1542 nt1.2□□□□□ -2.22
TY1B-PR2P0C2J0 SRP1YNL189W 1629 nt1.2□□□□□ -2.22
TY1B-PR2P0C2J0 YIL059CYIL059C 366 nt1.2□□□□□ -2.22
TY1B-PR2P0C2J0 YGR109W-AYGR109W-A 873 nt1.19□□□□□ -2.22
TY1B-PR2P0C2J0 IRC3YDR332W 2070 nt1.19□□□□□ -2.22
TY1B-PR2P0C2J0 SPO24YPR036W-A 204 nt1.19□□□□□ -2.22
TY1B-PR2P0C2J0 IRA2YOL081W 9240 nt1.18□□□□□ -2.22
TY1B-PR2P0C2J0 PEP8YJL053W 1140 nt1.18□□□□□ -2.22
TY1B-PR2P0C2J0 YNL114CYNL114C 372 nt1.18□□□□□ -2.22
TY1B-PR2P0C2J0 ARI1YGL157W 1044 nt1.17□□□□□ -2.22
TY1B-PR2P0C2J0 CSM2YIL132C 642 nt1.17□□□□□ -2.22
TY1B-PR2P0C2J0 PLM2YDR501W 1566 nt1.17□□□□□ -2.22
TY1B-PR2P0C2J0 YIL058WYIL058W 285 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 YOR082CYOR082C 342 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 OST2YOR103C 393 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 GAL7YBR018C 1101 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 MPS1YDL028C 2295 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 HMS1YOR032C 1305 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 BSC2YDR275W 708 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 COG1YGL223C 1254 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 CLC1YGR167W 702 nt1.16□□□□□ -2.22
TY1B-PR2P0C2J0 TRS65YGR166W 1683 nt1.15□□□□□ -2.22
TY1B-PR2P0C2J0 RAD9YDR217C 3930 nt1.15□□□□□ -2.22
TY1B-PR2P0C2J0 SNF5YBR289W 2718 nt1.15□□□□□ -2.23
TY1B-PR2P0C2J0 YCR007CYCR007C 720 nt1.15□□□□□ -2.23
TY1B-PR2P0C2J0 YKL145W-AYKL145W-A 93 nt1.15□□□□□ -2.23
TY1B-PR2P0C2J0 IAH1YOR126C 717 nt1.15□□□□□ -2.23
TY1B-PR2P0C2J0 VID24YBR105C 1089 nt1.15□□□□□ -2.23
TY1B-PR2P0C2J0 EAF1YDR359C 2949 nt1.15□□□□□ -2.23
TY1B-PR2P0C2J0 HTA1YDR225W 399 nt1.14□□□□□ -2.23
TY1B-PR2P0C2J0 MGE1YOR232W 687 nt1.14□□□□□ -2.23
TY1B-PR2P0C2J0 VPS9YML097C 1356 nt1.14□□□□□ -2.23
TY1B-PR2P0C2J0 YGL262WYGL262W 528 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 YUH1YJR099W 711 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 SFT1YKL006C-A 294 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 HRT3YLR097C 1035 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 MTG1YMR097C 1104 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 ERD2YBL040C 660 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 YNL143CYNL143C 393 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 YNL234WYNL234W 1281 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 YBL083CYBL083C 426 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 YOR093CYOR093C 4947 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 TIM21YGR033C 720 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 YOL114CYOL114C 609 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 MSS11YMR164C 2277 nt1.13□□□□□ -2.23
TY1B-PR2P0C2J0 MAL33YBR297W 1407 nt1.12□□□□□ -2.23
TY1B-PR2P0C2J0 ASG1YIL130W 2895 nt1.12□□□□□ -2.23
TY1B-PR2P0C2J0 YJL133C-AYJL133C-A 225 nt1.12□□□□□ -2.23
TY1B-PR2P0C2J0 snR11snR11 258 nt1.12□□□□□ -2.23
TY1B-PR2P0C2J0 YPR148CYPR148C 1308 nt1.12□□□□□ -2.23
TY1B-PR2P0C2J0 RPS26BYER131W 360 nt1.11□□□□□ -2.23
TY1B-PR2P0C2J0 TRM2YKR056W 1920 nt1.11□□□□□ -2.23
TY1B-PR2P0C2J0 CDC36YDL165W 576 nt1.11□□□□□ -2.23
TY1B-PR2P0C2J0 YGR015CYGR015C 987 nt1.11□□□□□ -2.23
TY1B-PR2P0C2J0 URM1YIL008W 300 nt1.11□□□□□ -2.23
TY1B-PR2P0C2J0 MSA2YKR077W 1092 nt1.11□□□□□ -2.23
TY1B-PR2P0C2J0 YLR140WYLR140W 327 nt1.11□□□□□ -2.23
TY1B-PR2P0C2J0 STN1YDR082W 1485 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YDR098C-AYDR098C-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YDR210C-CYDR210C-C 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YDR261C-CYDR261C-C 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YDR316W-AYDR316W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YDR365W-AYDR365W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YER119C-AYER119C-A 372 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YER137C-AYER137C-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YER159C-AYER159C-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YGR027W-AYGR027W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YGR038C-AYGR038C-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YGR161C-CYGR161C-C 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YJR026WYJR026W 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YJR028WYJR028W 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YAR010CYAR010C 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YLR157C-AYLR157C-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YLR227W-AYLR227W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YLR256W-AYLR256W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YML040WYML040W 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YML045W-AYML045W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YMR051CYMR051C 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YNL054W-AYNL054W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YNL284C-AYNL284C-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YOL103W-AYOL103W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YBR012W-AYBR012W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YOR142W-AYOR142W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YPL257W-AYPL257W-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YPR137C-AYPR137C-A 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YPR158C-CYPR158C-C 1323 nt1.1□□□□□ -2.23
TY1B-PR2P0C2J0 YPR158W-AYPR158W-A 1323 nt1.1□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 62.2 ms