Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 BMP1-211ENST00000520970 4333 ntTSL 1 (best)15.7■□□□□ 0.11e-8■■■■□ 21.5
DKC1O60832 SPOP-207ENST00000504212 534 ntTSL 415.26■□□□□ 0.031e-8■■■■□ 21.5
DKC1O60832 SFI1-212ENST00000452250 2625 ntTSL 215.18■□□□□ 0.021e-8■■■■□ 21.5
DKC1O60832 SFI1-202ENST00000382162 5250 ntTSL 214.85□□□□□ -0.031e-8■■■■□ 21.5
DKC1O60832 SPOP-203ENST00000451526 450 ntTSL 214.74□□□□□ -0.051e-8■■■■□ 21.5
DKC1O60832 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.061e-8■■■■□ 21.5
DKC1O60832 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.68□□□□□ -0.061e-8■■■■□ 21.5
DKC1O60832 SPOP-212ENST00000507970 919 ntTSL 514.46□□□□□ -0.091e-8■■■■□ 21.5
DKC1O60832 SPOP-213ENST00000508805 428 ntTSL 314.46□□□□□ -0.091e-8■■■■□ 21.5
DKC1O60832 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.11e-8■■■■□ 21.5
DKC1O60832 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.131e-8■■■■□ 21.5
DKC1O60832 BMP1-212ENST00000520982 3244 ntTSL 1 (best)13.98□□□□□ -0.171e-8■■■■□ 21.5
DKC1O60832 BMP1-210ENST00000520626 3925 ntTSL 1 (best)13.92□□□□□ -0.181e-8■■■■□ 21.5
DKC1O60832 CTSH-215ENST00000534237 691 ntTSL 312.44□□□□□ -0.421e-8■■■■□ 21.5
DKC1O60832 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.431e-8■■■■□ 21.5
DKC1O60832 SPOP-202ENST00000393328 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.511e-8■■■■□ 21.5
DKC1O60832 CTSH-217ENST00000534533 836 ntTSL 311.66□□□□□ -0.541e-8■■■■□ 21.5
DKC1O60832 SFI1-204ENST00000400289 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.561e-8■■■■□ 21.5
DKC1O60832 ZNF432-205ENST00000598745 596 ntTSL 411.36□□□□□ -0.591e-8■■■■□ 21.5
DKC1O60832 PNCK-205ENST00000411968 557 ntTSL 511.05□□□□□ -0.642e-12■■■■□ 21.5
DKC1O60832 LINC01426-202ENST00000420877 2632 ntTSL 2 BASIC11.02□□□□□ -0.651e-8■■■■□ 21.5
DKC1O60832 ZNF432-206ENST00000600368 764 ntTSL 510.82□□□□□ -0.681e-8■■■■□ 21.5
DKC1O60832 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.741e-8■■■■□ 21.5
DKC1O60832 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.781e-8■■■■□ 21.5
DKC1O60832 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC9.09□□□□□ -0.951e-8■■■■□ 21.5
DKC1O60832 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.051e-8■■■■□ 21.5
DKC1O60832 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.52□□□□□ -1.211e-8■■■■□ 21.5
DKC1O60832 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.421e-8■■■■□ 21.5
DKC1O60832 TNKS-203ENST00000517770 574 ntTSL 46.08□□□□□ -1.442e-12■■■■□ 21.5
DKC1O60832 PLEKHA5-206ENST00000535357 597 ntTSL 34.98□□□□□ -1.611e-8■■■■□ 21.5
DKC1O60832 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.59□□□□□ -1.671e-8■■■■□ 21.5
DKC1O60832 NFIA-214ENST00000496712 603 ntTSL 34.18□□□□□ -1.742e-20■■■■□ 21.5
DKC1O60832 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.564e-7■■■■□ 21.4
DKC1O60832 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.564e-7■■■■□ 21.4
DKC1O60832 RPL4-214ENST00000567229 2003 ntTSL 513.08□□□□□ -0.311e-22■■■■□ 21.4
DKC1O60832 RPL4-215ENST00000568588 1864 ntTSL 2 BASIC12.53□□□□□ -0.41e-22■■■■□ 21.4
DKC1O60832 RPL4-217ENST00000569696 569 ntTSL 511.8□□□□□ -0.521e-22■■■■□ 21.4
DKC1O60832 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.611e-22■■■■□ 21.4
DKC1O60832 RPL4-210ENST00000566039 1099 ntTSL 29.92□□□□□ -0.821e-22■■■■□ 21.4
DKC1O60832 RPL4-203ENST00000561775 1396 ntTSL 58.68□□□□□ -1.021e-22■■■■□ 21.4
DKC1O60832 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.06■□□□□ 04e-10■■■■□ 21.3
DKC1O60832 SNORD45A-201ENST00000384512 84 ntBASIC-2.52□□□□□ -2.813e-86■■■■□ 21.3
DKC1O60832 STAT6-208ENST00000553499 603 ntTSL 418.76■□□□□ 0.596e-8■■■■□ 21.3
DKC1O60832 STAT6-206ENST00000553275 670 ntTSL 317.73■□□□□ 0.436e-8■■■■□ 21.3
DKC1O60832 STAT6-213ENST00000554825 644 ntTSL 416.37■□□□□ 0.216e-8■■■■□ 21.3
DKC1O60832 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.246e-8■■■■□ 21.3
DKC1O60832 STAT6-204ENST00000538913 2879 ntTSL 2 BASIC13.44□□□□□ -0.266e-8■■■■□ 21.3
DKC1O60832 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC13.21□□□□□ -0.36e-8■■■■□ 21.3
DKC1O60832 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.316e-8■■■■□ 21.3
DKC1O60832 STAT6-212ENST00000554764 2777 ntTSL 212.39□□□□□ -0.436e-8■■■■□ 21.3
DKC1O60832 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.826e-8■■■■□ 21.3
DKC1O60832 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.274e-7■■■■□ 21.2
DKC1O60832 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.168e-7■■■■□ 21.1
DKC1O60832 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 08e-7■■■■□ 21.1
DKC1O60832 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.225e-20■■■■□ 21
DKC1O60832 C3-210ENST00000598805 873 ntTSL 216.33■□□□□ 0.25e-20■■■■□ 21
DKC1O60832 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.02□□□□□ -1.132e-9■■■■□ 20.9
DKC1O60832 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.76■■□□□ 1.238e-7■■■■□ 20.9
DKC1O60832 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.928e-7■■■■□ 20.9
DKC1O60832 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.368e-7■■■■□ 20.9
DKC1O60832 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.92■■□□□ 1.581e-323■■■■□ 20.8
DKC1O60832 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.76■□□□□ 0.591e-323■■■■□ 20.8
DKC1O60832 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.331e-323■■■■□ 20.8
DKC1O60832 TCP1-211ENST00000539756 780 ntTSL 317.03■□□□□ 0.321e-323■■■■□ 20.8
DKC1O60832 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC14.79□□□□□ -0.041e-323■■■■□ 20.8
DKC1O60832 SNORA20-201ENST00000384662 132 ntBASIC0.27□□□□□ -2.371e-323■■■■□ 20.8
DKC1O60832 SNHG12-203ENST00000464115 712 ntTSL 320.4■□□□□ 0.861e-323■■■■□ 20.8
DKC1O60832 SNHG12-202ENST00000461832 675 ntTSL 215.62■□□□□ 0.091e-323■■■■□ 20.8
DKC1O60832 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.436e-8■■■■□ 20.8
DKC1O60832 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.436e-8■■■■□ 20.8
DKC1O60832 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.556e-8■■■■□ 20.8
DKC1O60832 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.696e-8■■■■□ 20.8
DKC1O60832 BPHL-206ENST00000430655 2157 ntTSL 1 (best)26.01■■□□□ 1.752e-7■■■■□ 20.8
DKC1O60832 BPHL-205ENST00000424847 1563 ntTSL 1 (best)25.51■■□□□ 1.672e-7■■■■□ 20.8
DKC1O60832 BPHL-207ENST00000433912 1063 ntTSL 222.6■■□□□ 1.212e-7■■■■□ 20.8
DKC1O60832 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.792e-7■■■■□ 20.8
DKC1O60832 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.46■□□□□ 0.712e-7■■■■□ 20.8
DKC1O60832 BPHL-212ENST00000490918 3723 ntTSL 212.84□□□□□ -0.352e-7■■■■□ 20.8
DKC1O60832 BPHL-211ENST00000488487 1137 ntTSL 512.76□□□□□ -0.372e-7■■■■□ 20.8
DKC1O60832 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC10.43□□□□□ -0.742e-7■■■■□ 20.8
DKC1O60832 BPHL-204ENST00000423798 576 ntTSL 310.07□□□□□ -0.82e-7■■■■□ 20.8
DKC1O60832 SNORD91B-202ENST00000608459 222 ntBASIC4.94□□□□□ -1.626e-15■■■■□ 20.8
DKC1O60832 SNORD91B-201ENST00000391250 95 nt1.77□□□□□ -2.136e-15■■■■□ 20.8
DKC1O60832 HDAC7-217ENST00000459625 6414 ntTSL 217.8■□□□□ 0.446e-12■■■■□ 20.7
DKC1O60832 HDAC7-219ENST00000470668 4266 ntTSL 215.25■□□□□ 0.036e-12■■■■□ 20.7
DKC1O60832 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.16e-12■■■■□ 20.7
DKC1O60832 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.16e-12■■■■□ 20.7
DKC1O60832 HDAC7-228ENST00000548938 2719 ntTSL 514.22□□□□□ -0.136e-12■■■■□ 20.7
DKC1O60832 SOX5-204ENST00000441133 638 ntTSL 2 BASIC12.64□□□□□ -0.399e-8■■■■□ 20.7
DKC1O60832 FAM20C-203ENST00000477004 344 ntTSL 39.57□□□□□ -0.882e-6■■■■□ 20.7
DKC1O60832 ARID3A-205ENST00000587532 1016 ntTSL 520.52■□□□□ 0.886e-10■■■■□ 20.7
DKC1O60832 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.786e-10■■■■□ 20.7
DKC1O60832 ARID3A-202ENST00000457152 549 ntTSL 514.67□□□□□ -0.066e-10■■■■□ 20.7
DKC1O60832 PPP4R2-203ENST00000470976 1033 ntTSL 230.44■■■□□ 2.462e-16■■■■□ 20.7
DKC1O60832 PPP4R2-205ENST00000482242 771 ntTSL 329.85■■■□□ 2.372e-16■■■■□ 20.7
DKC1O60832 PPP4R2-206ENST00000488810 877 ntTSL 529.63■■■□□ 2.332e-16■■■■□ 20.7
DKC1O60832 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.342e-16■■■■□ 20.7
DKC1O60832 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.7□□□□□ -1.022e-16■■■■□ 20.7
DKC1O60832 PPP4R2-204ENST00000476505 323 ntTSL 53.34□□□□□ -1.872e-16■■■■□ 20.7
DKC1O60832 AGAP1-209ENST00000453371 2138 ntTSL 519.42■□□□□ 0.75e-8■■■■□ 20.7
Retrieved 100 of 8,567 protein–RNA pairs in 259.3 ms