RNA–Protein interactions for RNA: ENST00000504212.5

SPOP-207, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-207ENST00000504212 NISCHQ9Y2I1 1504 aa33.69■■■□□ 2.98
SPOP-207ENST00000504212 ABCC9O60706 1549 aa30.87■■■□□ 2.53
SPOP-207ENST00000504212 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
SPOP-207ENST00000504212 DNAJC5BQ9UF47 199 aa29.31■■■□□ 2.28
SPOP-207ENST00000504212 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
SPOP-207ENST00000504212 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
SPOP-207ENST00000504212 NACADO15069 1562 aa28.82■■■□□ 2.2
SPOP-207ENST00000504212 PABPN1Q86U42 306 aaKnown RBP eCLIP28.76■■■□□ 2.19
SPOP-207ENST00000504212 UNC13AQ9UPW8 1703 aa28.27■■■□□ 2.12
SPOP-207ENST00000504212 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
SPOP-207ENST00000504212 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
SPOP-207ENST00000504212 CECR2Q9BXF3 1484 aa27.84■■■□□ 2.05
SPOP-207ENST00000504212 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
SPOP-207ENST00000504212 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
SPOP-207ENST00000504212 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
SPOP-207ENST00000504212 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
SPOP-207ENST00000504212 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
SPOP-207ENST00000504212 EIF4G1Q04637 1599 aaKnown RBP27.62■■■□□ 2.01
SPOP-207ENST00000504212 DNAJC5Q9H3Z4 198 aa27.25■■□□□ 1.95
SPOP-207ENST00000504212 ERCC6Q03468 1493 aa26.73■■□□□ 1.87
SPOP-207ENST00000504212 CUX2O14529 1486 aa26.72■■□□□ 1.87
SPOP-207ENST00000504212 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
SPOP-207ENST00000504212 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
SPOP-207ENST00000504212 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
SPOP-207ENST00000504212 NESP48681 1621 aa26.36■■□□□ 1.81
SPOP-207ENST00000504212 HMGXB3Q12766 1538 aa26.35■■□□□ 1.81
SPOP-207ENST00000504212 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
SPOP-207ENST00000504212 BAZ1BQ9UIG0 1483 aaKnown RBP26.27■■□□□ 1.8
SPOP-207ENST00000504212 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
SPOP-207ENST00000504212 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
SPOP-207ENST00000504212 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
SPOP-207ENST00000504212 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
SPOP-207ENST00000504212 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
SPOP-207ENST00000504212 TRIM41Q8WV44 630 aa26■■□□□ 1.75
SPOP-207ENST00000504212 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
SPOP-207ENST00000504212 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
SPOP-207ENST00000504212 CADPSQ9ULU8 1353 aa25.88■■□□□ 1.73
SPOP-207ENST00000504212 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
SPOP-207ENST00000504212 WDR62O43379 1518 aa25.68■■□□□ 1.7
SPOP-207ENST00000504212 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
SPOP-207ENST00000504212 WIZO95785 1651 aa25.59■■□□□ 1.69
SPOP-207ENST00000504212 OSCARQ8IYS5 282 aa25.58■■□□□ 1.69
SPOP-207ENST00000504212 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
SPOP-207ENST00000504212 CFTRP13569 1480 aa25.44■■□□□ 1.66
SPOP-207ENST00000504212 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
SPOP-207ENST00000504212 RSF1Q96T23 1441 aaPredicted RBP25.31■■□□□ 1.64
SPOP-207ENST00000504212 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.63
SPOP-207ENST00000504212 IFT140Q96RY7 1462 aa25.13■■□□□ 1.61
SPOP-207ENST00000504212 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
SPOP-207ENST00000504212 RIMBP3CA6NJZ7 1639 aa25.1■■□□□ 1.61
SPOP-207ENST00000504212 RIMBP3BA6NNM3 1639 aa25.1■■□□□ 1.61
SPOP-207ENST00000504212 RIMBP3Q9UFD9 1639 aa25.1■■□□□ 1.61
SPOP-207ENST00000504212 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
SPOP-207ENST00000504212 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
SPOP-207ENST00000504212 ARHGEF11O15085 1522 aa25.02■■□□□ 1.6
SPOP-207ENST00000504212 TOPBP1Q92547 1522 aa24.99■■□□□ 1.59
SPOP-207ENST00000504212 PRDM2Q13029 1718 aa24.95■■□□□ 1.59
SPOP-207ENST00000504212 FBLN2P98095 1184 aa24.95■■□□□ 1.58
SPOP-207ENST00000504212 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
SPOP-207ENST00000504212 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
SPOP-207ENST00000504212 AQRO60306 1485 aaKnown RBP eCLIP24.88■■□□□ 1.571e-6■■■■■ 27.6
SPOP-207ENST00000504212 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
SPOP-207ENST00000504212 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
SPOP-207ENST00000504212 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
SPOP-207ENST00000504212 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
SPOP-207ENST00000504212 CHD1O14646 1710 aa24.72■■□□□ 1.55
SPOP-207ENST00000504212 POLA1P09884 1462 aaPredicted RBP24.72■■□□□ 1.55
SPOP-207ENST00000504212 TDRD9Q8NDG6 1382 aaKnown RBP24.7■■□□□ 1.55
SPOP-207ENST00000504212 RAD54L2Q9Y4B4 1467 aa24.68■■□□□ 1.54
SPOP-207ENST00000504212 SOGA1O94964 1423 aa24.68■■□□□ 1.54
SPOP-207ENST00000504212 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
SPOP-207ENST00000504212 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
SPOP-207ENST00000504212 AEBP2Q6ZN18 517 aaPredicted RBP24.53■■□□□ 1.52
SPOP-207ENST00000504212 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
SPOP-207ENST00000504212 SUPT5HO00267 1087 aaKnown RBP24.52■■□□□ 1.52
SPOP-207ENST00000504212 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
SPOP-207ENST00000504212 MAGI1Q96QZ7 1491 aaPredicted RBP24.48■■□□□ 1.51
SPOP-207ENST00000504212 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
SPOP-207ENST00000504212 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
SPOP-207ENST00000504212 WDR97A6NE52 1622 aa24.45■■□□□ 1.5
SPOP-207ENST00000504212 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
SPOP-207ENST00000504212 CUX1P39880 1505 aa24.4■■□□□ 1.5
SPOP-207ENST00000504212 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
SPOP-207ENST00000504212 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
SPOP-207ENST00000504212 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.46
SPOP-207ENST00000504212 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
SPOP-207ENST00000504212 ABCA5Q8WWZ7 1642 aa24.12■■□□□ 1.45
SPOP-207ENST00000504212 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
SPOP-207ENST00000504212 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.45
SPOP-207ENST00000504212 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
SPOP-207ENST00000504212 NUP160Q12769 1436 aa24.04■■□□□ 1.44
SPOP-207ENST00000504212 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
SPOP-207ENST00000504212 ADAMTS12P58397 1594 aa24■■□□□ 1.43
SPOP-207ENST00000504212 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
SPOP-207ENST00000504212 JPH4Q96JJ6 628 aa23.93■■□□□ 1.42
SPOP-207ENST00000504212 NPM1P06748 294 aaKnown RBP eCLIP23.92■■□□□ 1.42
SPOP-207ENST00000504212 SHROOM2Q13796 1616 aa23.89■■□□□ 1.42
SPOP-207ENST00000504212 FAM69CQ0P6D2 419 aa23.88■■□□□ 1.41
SPOP-207ENST00000504212 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
SPOP-207ENST00000504212 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms