RNA–Protein interactions for RNA: ENST00000534533.5

CTSH-217, Transcript of cathepsin H, humanhuman

TSL 3

Gene CTSH, Length 836 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSH-217ENST00000534533 NISCHQ9Y2I1 1504 aa25.48■■□□□ 1.67
CTSH-217ENST00000534533 ABCC9O60706 1549 aa22.79■■□□□ 1.24
CTSH-217ENST00000534533 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
CTSH-217ENST00000534533 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
CTSH-217ENST00000534533 RB1CC1Q8TDY2 1594 aa21.71■■□□□ 1.07
CTSH-217ENST00000534533 NACADO15069 1562 aa21.59■■□□□ 1.05
CTSH-217ENST00000534533 DNAJC5BQ9UF47 199 aa21.34■■□□□ 1.01
CTSH-217ENST00000534533 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 14e-7■□□□□ 8.4
CTSH-217ENST00000534533 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
CTSH-217ENST00000534533 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
CTSH-217ENST00000534533 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
CTSH-217ENST00000534533 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
CTSH-217ENST00000534533 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
CTSH-217ENST00000534533 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
CTSH-217ENST00000534533 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
CTSH-217ENST00000534533 CC2D2AQ9P2K1 1620 aa20.54■□□□□ 0.88
CTSH-217ENST00000534533 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
CTSH-217ENST00000534533 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
CTSH-217ENST00000534533 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
CTSH-217ENST00000534533 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
CTSH-217ENST00000534533 SMARCA2P51531 1590 aa19.83■□□□□ 0.77
CTSH-217ENST00000534533 SMARCA4P51532 1647 aa19.81■□□□□ 0.76
CTSH-217ENST00000534533 BAZ1AQ9NRL2 1556 aaPredicted RBP19.79■□□□□ 0.76
CTSH-217ENST00000534533 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
CTSH-217ENST00000534533 ERCC6Q03468 1493 aa19.73■□□□□ 0.75
CTSH-217ENST00000534533 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
CTSH-217ENST00000534533 DNAJC5Q9H3Z4 198 aa19.64■□□□□ 0.73
CTSH-217ENST00000534533 CUX2O14529 1486 aa19.62■□□□□ 0.73
CTSH-217ENST00000534533 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
CTSH-217ENST00000534533 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
CTSH-217ENST00000534533 NESP48681 1621 aa19.56■□□□□ 0.72
CTSH-217ENST00000534533 LAMC3Q9Y6N6 1575 aa19.45■□□□□ 0.7
CTSH-217ENST00000534533 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
CTSH-217ENST00000534533 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
CTSH-217ENST00000534533 WIZO95785 1651 aa19.35■□□□□ 0.69
CTSH-217ENST00000534533 RSF1Q96T23 1441 aaPredicted RBP19.28■□□□□ 0.68
CTSH-217ENST00000534533 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
CTSH-217ENST00000534533 KIF21AQ7Z4S6 1674 aa19.23■□□□□ 0.67
CTSH-217ENST00000534533 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
CTSH-217ENST00000534533 CEP164Q9UPV0 1460 aa19.14■□□□□ 0.65
CTSH-217ENST00000534533 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
CTSH-217ENST00000534533 CFTRP13569 1480 aa19.13■□□□□ 0.65
CTSH-217ENST00000534533 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
CTSH-217ENST00000534533 WDR62O43379 1518 aa19.08■□□□□ 0.64
CTSH-217ENST00000534533 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
CTSH-217ENST00000534533 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
CTSH-217ENST00000534533 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
CTSH-217ENST00000534533 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
CTSH-217ENST00000534533 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
CTSH-217ENST00000534533 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
CTSH-217ENST00000534533 IFT140Q96RY7 1462 aa18.77■□□□□ 0.59
CTSH-217ENST00000534533 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
CTSH-217ENST00000534533 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
CTSH-217ENST00000534533 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
CTSH-217ENST00000534533 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
CTSH-217ENST00000534533 FBLN2P98095 1184 aa18.58■□□□□ 0.56
CTSH-217ENST00000534533 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.568e-7■■■■□ 23.8
CTSH-217ENST00000534533 SOGA1O94964 1423 aa18.57■□□□□ 0.56
CTSH-217ENST00000534533 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
CTSH-217ENST00000534533 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
CTSH-217ENST00000534533 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
CTSH-217ENST00000534533 TARBP1Q13395 1621 aaKnown RBP18.5■□□□□ 0.55
CTSH-217ENST00000534533 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
CTSH-217ENST00000534533 CHMP7Q8WUX9 453 aaPredicted RBP18.46■□□□□ 0.55
CTSH-217ENST00000534533 FGD5Q6ZNL6 1462 aa18.46■□□□□ 0.54
CTSH-217ENST00000534533 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
CTSH-217ENST00000534533 RIMBP3CA6NJZ7 1639 aa18.41■□□□□ 0.54
CTSH-217ENST00000534533 RIMBP3BA6NNM3 1639 aa18.41■□□□□ 0.54
CTSH-217ENST00000534533 RIMBP3Q9UFD9 1639 aa18.41■□□□□ 0.54
CTSH-217ENST00000534533 CUX1P39880 1505 aa18.41■□□□□ 0.54
CTSH-217ENST00000534533 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
CTSH-217ENST00000534533 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
CTSH-217ENST00000534533 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
CTSH-217ENST00000534533 CHD1O14646 1710 aa18.35■□□□□ 0.53
CTSH-217ENST00000534533 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
CTSH-217ENST00000534533 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.52
CTSH-217ENST00000534533 GAPVD1Q14C86 1478 aa18.3■□□□□ 0.52
CTSH-217ENST00000534533 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
CTSH-217ENST00000534533 SYNJ2O15056 1496 aa18.27■□□□□ 0.52
CTSH-217ENST00000534533 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
CTSH-217ENST00000534533 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
CTSH-217ENST00000534533 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
CTSH-217ENST00000534533 ARAP1Q96P48 1450 aa18.21■□□□□ 0.51
CTSH-217ENST00000534533 CLASP1Q7Z460 1538 aa18.17■□□□□ 0.5
CTSH-217ENST00000534533 PBRM1Q86U86 1689 aa18.14■□□□□ 0.49
CTSH-217ENST00000534533 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
CTSH-217ENST00000534533 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
CTSH-217ENST00000534533 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
CTSH-217ENST00000534533 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
CTSH-217ENST00000534533 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
CTSH-217ENST00000534533 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
CTSH-217ENST00000534533 NUP160Q12769 1436 aa18.01■□□□□ 0.47
CTSH-217ENST00000534533 ADAMTS12P58397 1594 aa18■□□□□ 0.47
CTSH-217ENST00000534533 JPH4Q96JJ6 628 aa17.99■□□□□ 0.47
CTSH-217ENST00000534533 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
CTSH-217ENST00000534533 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
CTSH-217ENST00000534533 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
CTSH-217ENST00000534533 IGF1RP08069 1367 aa17.9■□□□□ 0.46
CTSH-217ENST00000534533 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
CTSH-217ENST00000534533 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms