RNA–Protein interactions for RNA: ENST00000566039.5

RPL4-210, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 1,099 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-210ENST00000566039 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
RPL4-210ENST00000566039 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
RPL4-210ENST00000566039 NISCHQ9Y2I1 1504 aa22.33■■□□□ 1.17
RPL4-210ENST00000566039 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
RPL4-210ENST00000566039 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
RPL4-210ENST00000566039 CCDC180Q9P1Z9 1646 aa20.23■□□□□ 0.83
RPL4-210ENST00000566039 ABCC9O60706 1549 aa19.91■□□□□ 0.78
RPL4-210ENST00000566039 FOXD1Q16676 465 aa19.5■□□□□ 0.71
RPL4-210ENST00000566039 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
RPL4-210ENST00000566039 NACADO15069 1562 aa19.06■□□□□ 0.64
RPL4-210ENST00000566039 MYO15BQ96JP2 1530 aa18.93■□□□□ 0.62
RPL4-210ENST00000566039 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
RPL4-210ENST00000566039 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
RPL4-210ENST00000566039 DCAF1Q9Y4B6 1507 aa18.63■□□□□ 0.57
RPL4-210ENST00000566039 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.57
RPL4-210ENST00000566039 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
RPL4-210ENST00000566039 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
RPL4-210ENST00000566039 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
RPL4-210ENST00000566039 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
RPL4-210ENST00000566039 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
RPL4-210ENST00000566039 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
RPL4-210ENST00000566039 ADRA2BP18089 450 aa18.2■□□□□ 0.5
RPL4-210ENST00000566039 PIAS4Q8N2W9 510 aaPredicted RBP18.2■□□□□ 0.5
RPL4-210ENST00000566039 MSH5O43196 834 aa18.19■□□□□ 0.5
RPL4-210ENST00000566039 SCRIBQ14160 1630 aa18.16■□□□□ 0.5
RPL4-210ENST00000566039 CC2D2AQ9P2K1 1620 aa18.1■□□□□ 0.49
RPL4-210ENST00000566039 EIF4G1Q04637 1599 aaKnown RBP18.1■□□□□ 0.49
RPL4-210ENST00000566039 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
RPL4-210ENST00000566039 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
RPL4-210ENST00000566039 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
RPL4-210ENST00000566039 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
RPL4-210ENST00000566039 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
RPL4-210ENST00000566039 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
RPL4-210ENST00000566039 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
RPL4-210ENST00000566039 CUX2O14529 1486 aa17.41■□□□□ 0.38
RPL4-210ENST00000566039 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
RPL4-210ENST00000566039 BAZ1AQ9NRL2 1556 aaPredicted RBP17.4■□□□□ 0.38
RPL4-210ENST00000566039 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
RPL4-210ENST00000566039 BAZ1BQ9UIG0 1483 aaKnown RBP17.26■□□□□ 0.35
RPL4-210ENST00000566039 DNAJC5Q9H3Z4 198 aa17.22■□□□□ 0.35
RPL4-210ENST00000566039 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
RPL4-210ENST00000566039 THOC2Q8NI27 1593 aaKnown RBP17.12■□□□□ 0.33
RPL4-210ENST00000566039 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
RPL4-210ENST00000566039 NESP48681 1621 aa17.08■□□□□ 0.32
RPL4-210ENST00000566039 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
RPL4-210ENST00000566039 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
RPL4-210ENST00000566039 CADPSQ9ULU8 1353 aa16.94■□□□□ 0.3
RPL4-210ENST00000566039 WDR62O43379 1518 aa16.91■□□□□ 0.3
RPL4-210ENST00000566039 WIZO95785 1651 aa16.89■□□□□ 0.29
RPL4-210ENST00000566039 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
RPL4-210ENST00000566039 TOP2AP11388 1531 aaKnown RBP16.82■□□□□ 0.28
RPL4-210ENST00000566039 CFTRP13569 1480 aa16.8■□□□□ 0.28
RPL4-210ENST00000566039 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
RPL4-210ENST00000566039 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
RPL4-210ENST00000566039 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
RPL4-210ENST00000566039 PRDM2Q13029 1718 aa16.73■□□□□ 0.27
RPL4-210ENST00000566039 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
RPL4-210ENST00000566039 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
RPL4-210ENST00000566039 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
RPL4-210ENST00000566039 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
RPL4-210ENST00000566039 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
RPL4-210ENST00000566039 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
RPL4-210ENST00000566039 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
RPL4-210ENST00000566039 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
RPL4-210ENST00000566039 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
RPL4-210ENST00000566039 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
RPL4-210ENST00000566039 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
RPL4-210ENST00000566039 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
RPL4-210ENST00000566039 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
RPL4-210ENST00000566039 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
RPL4-210ENST00000566039 ZNF608Q9ULD9 1512 aaPredicted RBP16.32■□□□□ 0.2
RPL4-210ENST00000566039 POLA1P09884 1462 aaPredicted RBP16.27■□□□□ 0.19
RPL4-210ENST00000566039 RIMBP3CA6NJZ7 1639 aa16.27■□□□□ 0.19
RPL4-210ENST00000566039 RIMBP3BA6NNM3 1639 aa16.27■□□□□ 0.19
RPL4-210ENST00000566039 RIMBP3Q9UFD9 1639 aa16.27■□□□□ 0.19
RPL4-210ENST00000566039 TRIM41Q8WV44 630 aa16.25■□□□□ 0.19
RPL4-210ENST00000566039 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
RPL4-210ENST00000566039 CHD1O14646 1710 aa16.2■□□□□ 0.18
RPL4-210ENST00000566039 MAGI1Q96QZ7 1491 aaPredicted RBP16.15■□□□□ 0.18
RPL4-210ENST00000566039 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.171e-11■■■■■ 83.5
RPL4-210ENST00000566039 FGD5Q6ZNL6 1462 aa16.13■□□□□ 0.17
RPL4-210ENST00000566039 SOGA1O94964 1423 aa16.12■□□□□ 0.17
RPL4-210ENST00000566039 CUX1P39880 1505 aa16.11■□□□□ 0.17
RPL4-210ENST00000566039 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
RPL4-210ENST00000566039 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
RPL4-210ENST00000566039 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
RPL4-210ENST00000566039 RAD54L2Q9Y4B4 1467 aa16.08■□□□□ 0.16
RPL4-210ENST00000566039 SNAPC4Q5SXM2 1469 aa16.07■□□□□ 0.16
RPL4-210ENST00000566039 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
RPL4-210ENST00000566039 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
RPL4-210ENST00000566039 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
RPL4-210ENST00000566039 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
RPL4-210ENST00000566039 PBRM1Q86U86 1689 aa16.03■□□□□ 0.16
RPL4-210ENST00000566039 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
RPL4-210ENST00000566039 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
RPL4-210ENST00000566039 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
RPL4-210ENST00000566039 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
RPL4-210ENST00000566039 BIVM-ERCC5R4GMW8 1640 aa15.97■□□□□ 0.15
RPL4-210ENST00000566039 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
RPL4-210ENST00000566039 FBLN2P98095 1184 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms