Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-6A0A0B4J262 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-6A0A0B4J262 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 AC024257.2-201ENST00000549699 147 ntBASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 PCDHAC2-203ENST00000615316 3011 ntBASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 AC020763.4-201ENST00000623414 4170 ntBASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TRAV8-6A0A0B4J262 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 AC005082.1-201ENST00000413042 2259 ntBASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
TRAV8-6A0A0B4J262 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 BX323043.1-201ENST00000641006 1765 ntBASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 FEM1AP1-201ENST00000431297 1995 ntBASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 LTB4R2-202ENST00000528054 3092 ntBASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.05■□□□□ -0
TRAV8-6A0A0B4J262 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 MIR4767-201ENST00000582827 78 ntBASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.04■□□□□ -0
TRAV8-6A0A0B4J262 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms