Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ODF4Q2M2E3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ODF4Q2M2E3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ODF4Q2M2E3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
ODF4Q2M2E3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 AC027702.1-201ENST00000563810 1770 ntBASIC18.2■□□□□ 0.5
ODF4Q2M2E3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 AC027682.1-201ENST00000562846 899 ntBASIC18.2■□□□□ 0.5
ODF4Q2M2E3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 FP700111.2-201ENST00000619190 1892 ntBASIC18.2■□□□□ 0.5
ODF4Q2M2E3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.2■□□□□ 0.5
ODF4Q2M2E3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 BX005040.4-201ENST00000637145 1518 ntBASIC18.19■□□□□ 0.5
ODF4Q2M2E3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.19■□□□□ 0.5
ODF4Q2M2E3 AFG3L1P-217ENST00000557444 2447 ntBASIC18.19■□□□□ 0.5
ODF4Q2M2E3 AC112907.3-201ENST00000577781 2400 ntBASIC18.19■□□□□ 0.5
ODF4Q2M2E3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 AC007225.1-201ENST00000566331 1836 ntBASIC18.18■□□□□ 0.5
ODF4Q2M2E3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ODF4Q2M2E3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ODF4Q2M2E3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ODF4Q2M2E3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ODF4Q2M2E3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ODF4Q2M2E3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ODF4Q2M2E3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ODF4Q2M2E3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms