Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 PEX6YNL329C 3093 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 THI21YPL258C 1656 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 VAC14YLR386W 2643 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 YDR250CYDR250C 276 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 YJR140W-AYJR140W-A 150 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 SUI1YNL244C 327 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 RPB11YOL005C 363 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 PEX11YOL147C 711 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 TRM7YBR061C 933 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 STB2YMR053C 2553 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 KAP114YGL241W 3015 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 BEM4YPL161C 1902 nt4.23□□□□□ -1.73
TY1A-MR1Q04215 YHR078WYHR078W 1659 nt4.22□□□□□ -1.73
TY1A-MR1Q04215 YKL222CYKL222C 2118 nt4.22□□□□□ -1.73
TY1A-MR1Q04215 RPS23AYGR118W 438 nt4.22□□□□□ -1.73
TY1A-MR1Q04215 ATP15YPL271W 189 nt4.22□□□□□ -1.73
TY1A-MR1Q04215 KCC4YCL024W 3114 nt4.22□□□□□ -1.73
TY1A-MR1Q04215 FRE4YNR060W 2160 nt4.21□□□□□ -1.73
TY1A-MR1Q04215 BIT61YJL058C 1632 nt4.21□□□□□ -1.73
TY1A-MR1Q04215 YDL011CYDL011C 324 nt4.21□□□□□ -1.74
TY1A-MR1Q04215 ARF1YDL192W 546 nt4.21□□□□□ -1.74
TY1A-MR1Q04215 YOR381W-AYOR381W-A 168 nt4.21□□□□□ -1.74
TY1A-MR1Q04215 PTR3YFR029W 2037 nt4.21□□□□□ -1.74
TY1A-MR1Q04215 NAN1YPL126W 2691 nt4.2□□□□□ -1.74
TY1A-MR1Q04215 PSF1YDR013W 627 nt4.2□□□□□ -1.74
TY1A-MR1Q04215 VPS41YDR080W 2979 nt4.2□□□□□ -1.74
TY1A-MR1Q04215 STV1YMR054W 2673 nt4.2□□□□□ -1.74
TY1A-MR1Q04215 DNM1YLL001W 2274 nt4.2□□□□□ -1.74
TY1A-MR1Q04215 MDR1YGR100W 2853 nt4.2□□□□□ -1.74
TY1A-MR1Q04215 RPS22BYLR367W 393 nt4.19□□□□□ -1.74
TY1A-MR1Q04215 YBR224WYBR224W 516 nt4.19□□□□□ -1.74
TY1A-MR1Q04215 REV1YOR346W 2958 nt4.19□□□□□ -1.74
TY1A-MR1Q04215 YCR023CYCR023C 1836 nt4.18□□□□□ -1.74
TY1A-MR1Q04215 TAF5YBR198C 2397 nt4.18□□□□□ -1.74
TY1A-MR1Q04215 YOR318CYOR318C 306 nt4.18□□□□□ -1.74
TY1A-MR1Q04215 NTC20YBR188C 423 nt4.18□□□□□ -1.74
TY1A-MR1Q04215 BLM10YFL007W 6432 nt4.18□□□□□ -1.74
TY1A-MR1Q04215 TPO2YGR138C 1845 nt4.17□□□□□ -1.74
TY1A-MR1Q04215 RPS24AYER074W 408 nt4.17□□□□□ -1.74
TY1A-MR1Q04215 RPS26BYER131W 360 nt4.17□□□□□ -1.74
TY1A-MR1Q04215 TGL4YKR089C 2733 nt4.17□□□□□ -1.74
TY1A-MR1Q04215 MDM32YOR147W 1869 nt4.17□□□□□ -1.74
TY1A-MR1Q04215 IRC3YDR332W 2070 nt4.17□□□□□ -1.74
TY1A-MR1Q04215 TIF4631YGR162W 2859 nt4.16□□□□□ -1.74
TY1A-MR1Q04215 TUB2YFL037W 1374 nt4.16□□□□□ -1.74
TY1A-MR1Q04215 YKR033CYKR033C 426 nt4.16□□□□□ -1.74
TY1A-MR1Q04215 ELM1YKL048C 1923 nt4.16□□□□□ -1.74
TY1A-MR1Q04215 MCM2YBL023C 2607 nt4.16□□□□□ -1.74
TY1A-MR1Q04215 PBS2YJL128C 2007 nt4.16□□□□□ -1.74
TY1A-MR1Q04215 ULP1YPL020C 1866 nt4.15□□□□□ -1.74
TY1A-MR1Q04215 SIP1YDR422C 2448 nt4.15□□□□□ -1.74
TY1A-MR1Q04215 DPB11YJL090C 2295 nt4.15□□□□□ -1.74
TY1A-MR1Q04215 PRO3YER023W 861 nt4.15□□□□□ -1.75
TY1A-MR1Q04215 YER091C-AYER091C-A 222 nt4.15□□□□□ -1.75
TY1A-MR1Q04215 RPS27BYHR021C 249 nt4.15□□□□□ -1.75
TY1A-MR1Q04215 snR52snR52 92 nt4.15□□□□□ -1.75
TY1A-MR1Q04215 AIP1YMR092C 1848 nt4.15□□□□□ -1.75
TY1A-MR1Q04215 YBR238CYBR238C 2196 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 SSB2YNL209W 1842 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 snR60snR60 104 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)CtK(CUU)C 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)D1tK(CUU)D1 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)D2tK(CUU)D2 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)E1tK(CUU)E1 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)E2tK(CUU)E2 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)FtK(CUU)F 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)G1tK(CUU)G1 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)G2tK(CUU)G2 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)G3tK(CUU)G3 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)ItK(CUU)I 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)JtK(CUU)J 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)KtK(CUU)K 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)MtK(CUU)M 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 tK(CUU)PtK(CUU)P 73 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 YGL217CYGL217C 342 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 YBL028CYBL028C 321 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 RFC3YNL290W 1023 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 SPT10YJL127C 1923 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 HIR2YOR038C 2628 nt4.14□□□□□ -1.75
TY1A-MR1Q04215 FLC1YPL221W 2382 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 OPT2YPR194C 2634 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 SRS2YJL092W 3525 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 YMR196WYMR196W 3267 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 PEX8YGR077C 1770 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 PCC1YKR095W-A 267 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 YMR321CYMR321C 318 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 AI5_ALPHAQ0070 1893 nt4.13□□□□□ -1.75
TY1A-MR1Q04215 SRP68YPL243W 1800 nt4.12□□□□□ -1.75
TY1A-MR1Q04215 HOT1YMR172W 2160 nt4.12□□□□□ -1.75
TY1A-MR1Q04215 SNU13YEL026W 381 nt4.12□□□□□ -1.75
TY1A-MR1Q04215 YAL044W-AYAL044W-A 333 nt4.12□□□□□ -1.75
TY1A-MR1Q04215 snR46snR46 197 nt4.12□□□□□ -1.75
TY1A-MR1Q04215 GMC1YDR506C 1827 nt4.11□□□□□ -1.75
TY1A-MR1Q04215 MSH4YFL003C 2637 nt4.11□□□□□ -1.75
TY1A-MR1Q04215 TIF4632YGL049C 2745 nt4.11□□□□□ -1.75
TY1A-MR1Q04215 IKS1YJL057C 2004 nt4.11□□□□□ -1.75
TY1A-MR1Q04215 YDR545C-AYDR545C-A 480 nt4.11□□□□□ -1.75
TY1A-MR1Q04215 LSM1YJL124C 519 nt4.11□□□□□ -1.75
TY1A-MR1Q04215 RRT15YLR162W-A 189 nt4.11□□□□□ -1.75
TY1A-MR1Q04215 YBL006W-AYBL006W-A 150 nt4.11□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 67.7 ms