Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 RSM18YER050C 417 nt2.92□□□□□ -1.94
SUB1P54000 PGD1YGL025C 1194 nt2.92□□□□□ -1.94
SUB1P54000 YCL002CYCL002C 792 nt2.92□□□□□ -1.94
SUB1P54000 CYR1YJL005W 6081 nt2.92□□□□□ -1.94
SUB1P54000 MMS22YLR320W 4365 nt2.91□□□□□ -1.94
SUB1P54000 YKL075CYKL075C 1353 nt2.91□□□□□ -1.94
SUB1P54000 UBC12YLR306W 567 nt2.91□□□□□ -1.94
SUB1P54000 RPL6AYML073C 531 nt2.91□□□□□ -1.94
SUB1P54000 IGO1YNL157W 507 nt2.91□□□□□ -1.94
SUB1P54000 ATP3YBR039W 936 nt2.91□□□□□ -1.94
SUB1P54000 RSA1YPL193W 1146 nt2.91□□□□□ -1.94
SUB1P54000 SSE1YPL106C 2082 nt2.9□□□□□ -1.95
SUB1P54000 GPI8YDR331W 1236 nt2.9□□□□□ -1.95
SUB1P54000 MRM2YGL136C 963 nt2.9□□□□□ -1.95
SUB1P54000 SDL1YIL167W 633 nt2.9□□□□□ -1.95
SUB1P54000 SDS22YKL193C 1017 nt2.9□□□□□ -1.95
SUB1P54000 SRO77YBL106C 3033 nt2.9□□□□□ -1.95
SUB1P54000 YLR001CYLR001C 2589 nt2.89□□□□□ -1.95
SUB1P54000 YDR115WYDR115W 318 nt2.89□□□□□ -1.95
SUB1P54000 YDR248CYDR248C 582 nt2.89□□□□□ -1.95
SUB1P54000 FMP32YFL046W 624 nt2.89□□□□□ -1.95
SUB1P54000 FAR7YFR008W 666 nt2.89□□□□□ -1.95
SUB1P54000 SPO11YHL022C 1197 nt2.89□□□□□ -1.95
SUB1P54000 YIL174WYIL174W 228 nt2.89□□□□□ -1.95
SUB1P54000 YJL222W-AYJL222W-A 228 nt2.89□□□□□ -1.95
SUB1P54000 ACF4YJR083C 930 nt2.89□□□□□ -1.95
SUB1P54000 AYT1YLL063C 1425 nt2.89□□□□□ -1.95
SUB1P54000 YLR224WYLR224W 1110 nt2.89□□□□□ -1.95
SUB1P54000 VTI1YMR197C 654 nt2.89□□□□□ -1.95
SUB1P54000 YNL235CYNL235C 432 nt2.89□□□□□ -1.95
SUB1P54000 OST2YOR103C 393 nt2.89□□□□□ -1.95
SUB1P54000 ATP20YPR020W 348 nt2.89□□□□□ -1.95
SUB1P54000 YPR170CYPR170C 336 nt2.89□□□□□ -1.95
SUB1P54000 UBR1YGR184C 5853 nt2.89□□□□□ -1.95
SUB1P54000 YIL082W-AYIL082W-A 4497 nt2.89□□□□□ -1.95
SUB1P54000 TCB2YNL087W 3537 nt2.88□□□□□ -1.95
SUB1P54000 MET18YIL128W 3099 nt2.88□□□□□ -1.95
SUB1P54000 TSA2YDR453C 591 nt2.88□□□□□ -1.95
SUB1P54000 YFR056CYFR056C 369 nt2.88□□□□□ -1.95
SUB1P54000 RCE1YMR274C 948 nt2.88□□□□□ -1.95
SUB1P54000 SWM2YNR004W 441 nt2.88□□□□□ -1.95
SUB1P54000 TPK2YPL203W 1143 nt2.88□□□□□ -1.95
SUB1P54000 YPR050CYPR050C 414 nt2.88□□□□□ -1.95
SUB1P54000 SLM4YBR077C 489 nt2.88□□□□□ -1.95
SUB1P54000 snR42snR42 351 nt2.88□□□□□ -1.95
SUB1P54000 ECM5YMR176W 4236 nt2.88□□□□□ -1.95
SUB1P54000 YPL216WYPL216W 3309 nt2.87□□□□□ -1.95
SUB1P54000 IRC2YDR112W 309 nt2.87□□□□□ -1.95
SUB1P54000 VPS74YDR372C 1038 nt2.87□□□□□ -1.95
SUB1P54000 TDA2YER071C 381 nt2.87□□□□□ -1.95
SUB1P54000 YGL165CYGL165C 579 nt2.87□□□□□ -1.95
SUB1P54000 RPL14BYHL001W 417 nt2.87□□□□□ -1.95
SUB1P54000 YMR144WYMR144W 1029 nt2.87□□□□□ -1.95
SUB1P54000 RPL33AYPL143W 324 nt2.87□□□□□ -1.95
SUB1P54000 BSC1YDL037C 987 nt2.86□□□□□ -1.95
SUB1P54000 YGL042CYGL042C 306 nt2.86□□□□□ -1.95
SUB1P54000 PEF1YGR058W 1008 nt2.86□□□□□ -1.95
SUB1P54000 YNL319WYNL319W 441 nt2.86□□□□□ -1.95
SUB1P54000 YPL034WYPL034W 498 nt2.86□□□□□ -1.95
SUB1P54000 ALG14YBR070C 714 nt2.86□□□□□ -1.95
SUB1P54000 RTT10YPL183C 3042 nt2.85□□□□□ -1.95
SUB1P54000 AXL1YPR122W 3627 nt2.85□□□□□ -1.95
SUB1P54000 YDL163WYDL163W 303 nt2.85□□□□□ -1.95
SUB1P54000 ATX2YOR079C 942 nt2.85□□□□□ -1.95
SUB1P54000 ARL3YPL051W 597 nt2.85□□□□□ -1.95
SUB1P54000 RGC1YPR115W 3252 nt2.85□□□□□ -1.95
SUB1P54000 MSL5YLR116W 1431 nt2.85□□□□□ -1.95
SUB1P54000 YPL150WYPL150W 2706 nt2.84□□□□□ -1.95
SUB1P54000 RAV1YJR033C 4074 nt2.84□□□□□ -1.95
SUB1P54000 RGA1YOR127W 3024 nt2.84□□□□□ -1.95
SUB1P54000 YDR199WYDR199W 366 nt2.84□□□□□ -1.95
SUB1P54000 SHE2YKL130C 741 nt2.84□□□□□ -1.95
SUB1P54000 SMA2YML066C 1110 nt2.84□□□□□ -1.95
SUB1P54000 GIM3YNL153C 390 nt2.84□□□□□ -1.95
SUB1P54000 IST2YBR086C 2841 nt2.84□□□□□ -1.95
SUB1P54000 LEU3YLR451W 2661 nt2.84□□□□□ -1.96
SUB1P54000 CLN3YAL040C 1743 nt2.83□□□□□ -1.96
SUB1P54000 MST27YGL051W 705 nt2.83□□□□□ -1.96
SUB1P54000 MND1YGL183C 660 nt2.83□□□□□ -1.96
SUB1P54000 SYS1YJL004C 612 nt2.83□□□□□ -1.96
SUB1P54000 YJR023CYJR023C 402 nt2.83□□□□□ -1.96
SUB1P54000 YKR033CYKR033C 426 nt2.83□□□□□ -1.96
SUB1P54000 PDP3YLR455W 915 nt2.83□□□□□ -1.96
SUB1P54000 HHT2YNL031C 411 nt2.83□□□□□ -1.96
SUB1P54000 MED8YBR193C 672 nt2.83□□□□□ -1.96
SUB1P54000 SSF2YDR312W 1362 nt2.83□□□□□ -1.96
SUB1P54000 SMC6YLR383W 3345 nt2.82□□□□□ -1.96
SUB1P54000 PRS3YHL011C 963 nt2.82□□□□□ -1.96
SUB1P54000 RPA190YOR341W 4995 nt2.82□□□□□ -1.96
SUB1P54000 SSF1YHR066W 1362 nt2.82□□□□□ -1.96
SUB1P54000 RTT107YHR154W 3213 nt2.82□□□□□ -1.96
SUB1P54000 YDR098C-BYDR098C-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YDR210C-DYDR210C-D 5268 nt2.82□□□□□ -1.96
SUB1P54000 YDR316W-BYDR316W-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YDR365W-BYDR365W-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YER138CYER138C 5268 nt2.82□□□□□ -1.96
SUB1P54000 YER160CYER160C 5268 nt2.82□□□□□ -1.96
SUB1P54000 YGR038C-BYGR038C-B 5268 nt2.82□□□□□ -1.96
SUB1P54000 YGR161C-DYGR161C-D 5268 nt2.82□□□□□ -1.96
SUB1P54000 YJR027WYJR027W 5268 nt2.82□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms