Protein–RNA interactions for Protein: P38316

ATG12, Ubiquitin-like protein ATG12, yeast

Predictions only

Length 186 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	P38316	YJL052C-A	YJL052C-A	120 nt		2.18	□□□□□ -2.06
ATG12	P38316	NYV1	YLR093C	762 nt		2.18	□□□□□ -2.06
ATG12	P38316	YNL303W	YNL303W	348 nt		2.18	□□□□□ -2.06
ATG12	P38316	MPP6	YNR024W	561 nt		2.18	□□□□□ -2.06
ATG12	P38316	NTC20	YBR188C	423 nt		2.18	□□□□□ -2.06
ATG12	P38316	UTP5	YDR398W	1932 nt		2.18	□□□□□ -2.06
ATG12	P38316	SLK19	YOR195W	2466 nt		2.18	□□□□□ -2.06
ATG12	P38316	GYP5	YPL249C	2685 nt		2.18	□□□□□ -2.06
ATG12	P38316	SMY2	YBR172C	2223 nt		2.18	□□□□□ -2.06
ATG12	P38316	SLU7	YDR088C	1149 nt		2.17	□□□□□ -2.06
ATG12	P38316	HTB1	YDR224C	396 nt		2.17	□□□□□ -2.06
ATG12	P38316	VAB2	YEL005C	849 nt		2.17	□□□□□ -2.06
ATG12	P38316	OTU2	YHL013C	924 nt		2.17	□□□□□ -2.06
ATG12	P38316	RPS1A	YLR441C	768 nt		2.17	□□□□□ -2.06
ATG12	P38316	YAP7	YOL028C	738 nt		2.17	□□□□□ -2.06
ATG12	P38316	ARL1	YBR164C	552 nt		2.17	□□□□□ -2.06
ATG12	P38316	YDR338C	YDR338C	2088 nt		2.17	□□□□□ -2.06
ATG12	P38316	ISW1	YBR245C	3390 nt		2.17	□□□□□ -2.06
ATG12	P38316	KOG1	YHR186C	4674 nt		2.17	□□□□□ -2.06
ATG12	P38316	RLF2	YPR018W	1821 nt		2.17	□□□□□ -2.06
ATG12	P38316	NEL1	YHR035W	1893 nt		2.16	□□□□□ -2.06
ATG12	P38316	YKU80	YMR106C	1890 nt		2.16	□□□□□ -2.06
ATG12	P38316	TAE2	YPL009C	3117 nt		2.16	□□□□□ -2.06
ATG12	P38316	snR76	snR76	109 nt		2.16	□□□□□ -2.06
ATG12	P38316	YER189W	YER189W	369 nt		2.16	□□□□□ -2.06
ATG12	P38316	YMR31	YFR049W	372 nt		2.16	□□□□□ -2.06
ATG12	P38316	RPS30A	YLR287C-A	192 nt		2.16	□□□□□ -2.06
ATG12	P38316	RPS29A	YLR388W	171 nt		2.16	□□□□□ -2.06
ATG12	P38316	DGR1	YNL130C-A	147 nt		2.16	□□□□□ -2.06
ATG12	P38316	SPR2	YOR214C	711 nt		2.16	□□□□□ -2.06
ATG12	P38316	YRO2	YBR054W	1035 nt		2.16	□□□□□ -2.06
ATG12	P38316	MBA1	YBR185C	837 nt		2.16	□□□□□ -2.06
ATG12	P38316	SWA2	YDR320C	2007 nt		2.16	□□□□□ -2.06
ATG12	P38316	AMS1	YGL156W	3252 nt		2.16	□□□□□ -2.06
ATG12	P38316	SGM1	YJR134C	2124 nt		2.15	□□□□□ -2.06
ATG12	P38316	FAR11	YNL127W	2862 nt		2.15	□□□□□ -2.07
ATG12	P38316	COG3	YER157W	2406 nt		2.15	□□□□□ -2.07
ATG12	P38316	YDR381C-A	YDR381C-A	345 nt		2.15	□□□□□ -2.07
ATG12	P38316	YOL106W	YOL106W	354 nt		2.15	□□□□□ -2.07
ATG12	P38316	ACM1	YPL267W	630 nt		2.15	□□□□□ -2.07
ATG12	P38316	ATP20	YPR020W	348 nt		2.15	□□□□□ -2.07
ATG12	P38316	FAB1	YFR019W	6837 nt		2.15	□□□□□ -2.07
ATG12	P38316	PSK2	YOL045W	3306 nt		2.15	□□□□□ -2.07
ATG12	P38316	BAS1	YKR099W	2436 nt		2.15	□□□□□ -2.07
ATG12	P38316	TPS2	YDR074W	2691 nt		2.14	□□□□□ -2.07
ATG12	P38316	SIP3	YNL257C	3690 nt		2.14	□□□□□ -2.07
ATG12	P38316	SAG1	YJR004C	1953 nt		2.14	□□□□□ -2.07
ATG12	P38316	ORC2	YBR060C	1863 nt		2.14	□□□□□ -2.07
ATG12	P38316	YEA4	YEL004W	1029 nt		2.14	□□□□□ -2.07
ATG12	P38316	YER158W-A	YER158W-A	216 nt		2.14	□□□□□ -2.07
ATG12	P38316	RPL11B	YGR085C	525 nt		2.14	□□□□□ -2.07
ATG12	P38316	YGR293C	YGR293C	462 nt		2.14	□□□□□ -2.07
ATG12	P38316	ATX1	YNL259C	222 nt		2.14	□□□□□ -2.07
ATG12	P38316	CSI2	YOL007C	1026 nt		2.14	□□□□□ -2.07
ATG12	P38316	MGE1	YOR232W	687 nt		2.14	□□□□□ -2.07
ATG12	P38316	RPL11A	YPR102C	525 nt		2.14	□□□□□ -2.07
ATG12	P38316	DAD3	YBR233W-A	285 nt		2.14	□□□□□ -2.07
ATG12	P38316	YBR287W	YBR287W	1284 nt		2.14	□□□□□ -2.07
ATG12	P38316	PSD2	YGR170W	3417 nt		2.14	□□□□□ -2.07
ATG12	P38316	EDS1	YBR033W	2760 nt		2.13	□□□□□ -2.07
ATG12	P38316	ATP16	YDL004W	483 nt		2.13	□□□□□ -2.07
ATG12	P38316	UBC5	YDR059C	447 nt		2.13	□□□□□ -2.07
ATG12	P38316	YDR537C	YDR537C	606 nt		2.13	□□□□□ -2.07
ATG12	P38316	BTN2	YGR142W	1233 nt		2.13	□□□□□ -2.07
ATG12	P38316	ESF2	YNR054C	951 nt		2.13	□□□□□ -2.07
ATG12	P38316	GRE2	YOL151W	1029 nt		2.13	□□□□□ -2.07
ATG12	P38316	PEX27	YOR193W	1131 nt		2.13	□□□□□ -2.07
ATG12	P38316	YBR063C	YBR063C	1215 nt		2.13	□□□□□ -2.07
ATG12	P38316	SDC25	YLL016W	3147 nt		2.13	□□□□□ -2.07
ATG12	P38316	YDR261W-A	YDR261W-A	1317 nt		2.13	□□□□□ -2.07
ATG12	P38316	PEX8	YGR077C	1770 nt		2.13	□□□□□ -2.07
ATG12	P38316	PUF4	YGL014W	2667 nt		2.12	□□□□□ -2.07
ATG12	P38316	STE2	YFL026W	1296 nt		2.12	□□□□□ -2.07
ATG12	P38316	RTS3	YGR161C	792 nt		2.12	□□□□□ -2.07
ATG12	P38316	RPC25	YKL144C	639 nt		2.12	□□□□□ -2.07
ATG12	P38316	YLL044W	YLL044W	447 nt		2.12	□□□□□ -2.07
ATG12	P38316	YLR050C	YLR050C	486 nt		2.12	□□□□□ -2.07
ATG12	P38316	GIM5	YML094W	492 nt		2.12	□□□□□ -2.07
ATG12	P38316	snR24	snR24	89 nt		2.12	□□□□□ -2.07
ATG12	P38316	CBP6	YBR120C	489 nt		2.12	□□□□□ -2.07
ATG12	P38316	YCL007C	YCL007C	393 nt		2.12	□□□□□ -2.07
ATG12	P38316	ALY1	YKR021W	2748 nt		2.12	□□□□□ -2.07
ATG12	P38316	NPR3	YHL023C	3441 nt		2.12	□□□□□ -2.07
ATG12	P38316	ESC2	YDR363W	1371 nt		2.11	□□□□□ -2.07
ATG12	P38316	BRE1	YDL074C	2103 nt		2.11	□□□□□ -2.07
ATG12	P38316	UBC13	YDR092W	462 nt		2.11	□□□□□ -2.07
ATG12	P38316	DAD4	YDR320C-A	219 nt		2.11	□□□□□ -2.07
ATG12	P38316	TIF35	YDR429C	825 nt		2.11	□□□□□ -2.07
ATG12	P38316	RSM27	YGR215W	333 nt		2.11	□□□□□ -2.07
ATG12	P38316	YJL147C	YJL147C	1149 nt		2.11	□□□□□ -2.07
ATG12	P38316	MF(ALPHA)1	YPL187W	498 nt		2.11	□□□□□ -2.07
ATG12	P38316	RRP15	YPR143W	753 nt		2.11	□□□□□ -2.07
ATG12	P38316	SIR3	YLR442C	2937 nt		2.11	□□□□□ -2.07
ATG12	P38316	YPK1	YKL126W	2043 nt		2.11	□□□□□ -2.07
ATG12	P38316	SIR4	YDR227W	4077 nt		2.11	□□□□□ -2.07
ATG12	P38316	KRE33	YNL132W	3171 nt		2.11	□□□□□ -2.07
ATG12	P38316	SSP1	YHR184W	1716 nt		2.11	□□□□□ -2.07
ATG12	P38316	HRD3	YLR207W	2502 nt		2.11	□□□□□ -2.07
ATG12	P38316	NPR1	YNL183C	2373 nt		2.1	□□□□□ -2.07
ATG12	P38316	BFR1	YOR198C	1413 nt		2.1	□□□□□ -2.07

Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms