Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC016405.3-201ENST00000607710 860 ntBASIC20.57■□□□□ 0.88
HMGCLP35914 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCLP35914 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLP35914 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCLP35914 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGCLP35914 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGCLP35914 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGCLP35914 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGCLP35914 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLP35914 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLP35914 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HMGCLP35914 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLP35914 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLP35914 RARRES2P4-201ENST00000514074 484 ntBASIC20.56■□□□□ 0.88
HMGCLP35914 AC005181.1-201ENST00000604782 1256 ntBASIC20.56■□□□□ 0.88
HMGCLP35914 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGCLP35914 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLP35914 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
HMGCLP35914 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
HMGCLP35914 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.56■□□□□ 0.88
HMGCLP35914 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLP35914 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGCLP35914 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HMGCLP35914 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCLP35914 AC027702.1-201ENST00000563810 1770 ntBASIC20.55■□□□□ 0.88
HMGCLP35914 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.55■□□□□ 0.88
HMGCLP35914 CYP2T1P-201ENST00000432607 1285 ntBASIC20.55■□□□□ 0.88
HMGCLP35914 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGCLP35914 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCLP35914 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGCLP35914 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HMGCLP35914 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HMGCLP35914 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGCLP35914 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.54■□□□□ 0.88
HMGCLP35914 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.54■□□□□ 0.88
HMGCLP35914 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.54■□□□□ 0.88
HMGCLP35914 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HMGCLP35914 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.54■□□□□ 0.88
HMGCLP35914 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMGCLP35914 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.54■□□□□ 0.88
HMGCLP35914 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.54■□□□□ 0.88
HMGCLP35914 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.54■□□□□ 0.88
HMGCLP35914 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMGCLP35914 AC069236.1-201ENST00000604339 616 ntBASIC20.54■□□□□ 0.88
HMGCLP35914 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.54■□□□□ 0.88
HMGCLP35914 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMGCLP35914 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.54■□□□□ 0.88
HMGCLP35914 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HMGCLP35914 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
HMGCLP35914 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCLP35914 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
HMGCLP35914 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HMGCLP35914 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
HMGCLP35914 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
HMGCLP35914 CROCCP5-201ENST00000436658 830 ntBASIC20.53■□□□□ 0.88
HMGCLP35914 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 OR10C1-204ENST00000622521 1039 ntBASIC20.53■□□□□ 0.88
HMGCLP35914 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCLP35914 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCLP35914 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
HMGCLP35914 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLP35914 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLP35914 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLP35914 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLP35914 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCLP35914 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCLP35914 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms