Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PABPC1P11940 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.11■□□□□ 0.97
PABPC1P11940 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.11■□□□□ 0.97
PABPC1P11940 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.11■□□□□ 0.97
PABPC1P11940 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
PABPC1P11940 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.11■□□□□ 0.97
PABPC1P11940 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PABPC1P11940 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.1■□□□□ 0.97
PABPC1P11940 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.1■□□□□ 0.97
PABPC1P11940 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.1■□□□□ 0.97
PABPC1P11940 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PABPC1P11940 TSPY20P-201ENST00000450910 630 ntBASIC21.1■□□□□ 0.97
PABPC1P11940 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.1■□□□□ 0.97
PABPC1P11940 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.1■□□□□ 0.97
PABPC1P11940 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PABPC1P11940 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.1■□□□□ 0.97
PABPC1P11940 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.1■□□□□ 0.97
PABPC1P11940 FBXW4P1-201ENST00000426721 2239 ntBASIC21.1■□□□□ 0.97
PABPC1P11940 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PABPC1P11940 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
PABPC1P11940 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PABPC1P11940 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PABPC1P11940 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.09■□□□□ 0.97
PABPC1P11940 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.09■□□□□ 0.97
PABPC1P11940 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.09■□□□□ 0.97
PABPC1P11940 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PABPC1P11940 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PABPC1P11940 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.09■□□□□ 0.97
PABPC1P11940 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PABPC1P11940 RNA5SP413-201ENST00000516373 109 ntBASIC21.09■□□□□ 0.97
PABPC1P11940 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
PABPC1P11940 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.09■□□□□ 0.97
PABPC1P11940 MIR4651-201ENST00000582622 73 ntBASIC21.09■□□□□ 0.97
PABPC1P11940 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.09■□□□□ 0.97
PABPC1P11940 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.09■□□□□ 0.97
PABPC1P11940 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
PABPC1P11940 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PABPC1P11940 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PABPC1P11940 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.09■□□□□ 0.97
PABPC1P11940 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PABPC1P11940 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PABPC1P11940 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PABPC1P11940 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PABPC1P11940 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.08■□□□□ 0.97
PABPC1P11940 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PABPC1P11940 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.08■□□□□ 0.97
PABPC1P11940 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PABPC1P11940 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.08■□□□□ 0.97
PABPC1P11940 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PABPC1P11940 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PABPC1P11940 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PABPC1P11940 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PABPC1P11940 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.07■□□□□ 0.96
PABPC1P11940 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.07■□□□□ 0.96
PABPC1P11940 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PABPC1P11940 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.07■□□□□ 0.96
PABPC1P11940 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PABPC1P11940 AL589743.5-201ENST00000616611 1050 ntBASIC21.07■□□□□ 0.96
PABPC1P11940 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
PABPC1P11940 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.07■□□□□ 0.96
PABPC1P11940 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.07■□□□□ 0.96
PABPC1P11940 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.07■□□□□ 0.96
PABPC1P11940 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PABPC1P11940 CYP21A1P-202ENST00000354927 1481 ntBASIC21.07■□□□□ 0.96
PABPC1P11940 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PABPC1P11940 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PABPC1P11940 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.06■□□□□ 0.96
PABPC1P11940 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PABPC1P11940 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
PABPC1P11940 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PABPC1P11940 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.06■□□□□ 0.96
PABPC1P11940 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PABPC1P11940 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms