Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 HMF1YER057C 390 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 SPR6YER115C 576 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 SGN1YIR001C 753 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 EFB1YAL003W 621 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 SSP120YLR250W 705 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 SSN8YNL025C 972 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 PGA1YNL158W 597 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 RED1YLR263W 2484 nt3.93□□□□□ -1.78
TY1A-LR2P0CX72 ALY1YKR021W 2748 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 YDR133CYDR133C 336 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 YDR406W-AYDR406W-A 246 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 YJR140W-AYJR140W-A 150 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 YKL111CYKL111C 336 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 HCH1YNL281W 462 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 RPB11YOL005C 363 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 EGT2YNL327W 3126 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 FUN12YAL035W 3009 nt3.92□□□□□ -1.78
TY1A-LR2P0CX72 PEP5YMR231W 3090 nt3.91□□□□□ -1.78
TY1A-LR2P0CX72 RAD27YKL113C 1149 nt3.91□□□□□ -1.78
TY1A-LR2P0CX72 SSH4YKL124W 1740 nt3.91□□□□□ -1.78
TY1A-LR2P0CX72 JJJ2YJL162C 1752 nt3.91□□□□□ -1.78
TY1A-LR2P0CX72 RPG1YBR079C 2895 nt3.9□□□□□ -1.78
TY1A-LR2P0CX72 CYC7YEL039C 342 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 YFL063WYFL063W 456 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 HYR1YIR037W 492 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 YJR023CYJR023C 402 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 PRE8YML092C 753 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 TVP18YMR071C 504 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 YPL238CYPL238C 390 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 YBP1YBR216C 2025 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 SEC6YIL068C 2418 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 ECM22YLR228C 2445 nt3.9□□□□□ -1.79
TY1A-LR2P0CX72 VMA1YDL185W 3216 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 IZH3YLR023C 1632 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 YDR089WYDR089W 2610 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 TIF35YDR429C 825 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 IRC4YDR540C 540 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 YGL188C-AYGL188C-A 141 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 RPC10YHR143W-A 213 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 YAL004WYAL004W 648 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 YKL156C-AYKL156C-A 117 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 SUI1YNL244C 327 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 YOR200WYOR200W 399 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 BAR1YIL015W 1764 nt3.89□□□□□ -1.79
TY1A-LR2P0CX72 MDM32YOR147W 1869 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 YEL018C-AYEL018C-A 534 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 BCD1YHR040W 1101 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 YAL047W-AYAL047W-A 330 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 IRC23YOR044W 474 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 snR51snR51 107 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 VID27YNL212W 2349 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 SNX41YDR425W 1878 nt3.88□□□□□ -1.79
TY1A-LR2P0CX72 SLM2YNL047C 1971 nt3.87□□□□□ -1.79
TY1A-LR2P0CX72 DPB11YJL090C 2295 nt3.87□□□□□ -1.79
TY1A-LR2P0CX72 SMI1YGR229C 1518 nt3.87□□□□□ -1.79
TY1A-LR2P0CX72 VPS29YHR012W 849 nt3.87□□□□□ -1.79
TY1A-LR2P0CX72 YNL198CYNL198C 303 nt3.87□□□□□ -1.79
TY1A-LR2P0CX72 YPL229WYPL229W 621 nt3.87□□□□□ -1.79
TY1A-LR2P0CX72 YPR099CYPR099C 357 nt3.87□□□□□ -1.79
TY1A-LR2P0CX72 SLP1YOR154W 1764 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 YDR169C-AYDR169C-A 150 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 SMT3YDR510W 306 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 YER079C-AYER079C-A 339 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 YER188C-AYER188C-A 300 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 NSG1YHR133C 876 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 RPL9BYNL067W 576 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 PHO8YDR481C 1701 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 SNF2YOR290C 5112 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 SWI1YPL016W 3945 nt3.86□□□□□ -1.79
TY1A-LR2P0CX72 UBP5YER144C 2418 nt3.85□□□□□ -1.79
TY1A-LR2P0CX72 SRO7YPR032W 3102 nt3.85□□□□□ -1.79
TY1A-LR2P0CX72 RPL30YGL030W 318 nt3.85□□□□□ -1.79
TY1A-LR2P0CX72 YGL088WYGL088W 366 nt3.85□□□□□ -1.79
TY1A-LR2P0CX72 YBL006W-AYBL006W-A 150 nt3.85□□□□□ -1.79
TY1A-LR2P0CX72 YSH1YLR277C 2340 nt3.85□□□□□ -1.79
TY1A-LR2P0CX72 VID28YIL017C 2766 nt3.85□□□□□ -1.79
TY1A-LR2P0CX72 CCT7YJL111W 1653 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 CWC22YGR278W 1734 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 IRC10YOL015W 1761 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 YDR250CYDR250C 276 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 WIP1YDR374W-A 270 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 AIM11YER093C-A 414 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 FMP10YER182W 735 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 YFR056CYFR056C 369 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 ACE2YLR131C 2313 nt3.84□□□□□ -1.79
TY1A-LR2P0CX72 YKL050CYKL050C 2769 nt3.84□□□□□ -1.8
TY1A-LR2P0CX72 snR80snR80 171 nt3.83□□□□□ -1.8
TY1A-LR2P0CX72 BAT1YHR208W 1182 nt3.83□□□□□ -1.8
TY1A-LR2P0CX72 URM1YIL008W 300 nt3.83□□□□□ -1.8
TY1A-LR2P0CX72 YBL073WYBL073W 312 nt3.83□□□□□ -1.8
TY1A-LR2P0CX72 THI21YPL258C 1656 nt3.83□□□□□ -1.8
TY1A-LR2P0CX72 VPS73YGL104C 1461 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 YGL149WYGL149W 306 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 PAU14YIL176C 363 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 PAU1YJL223C 363 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 HHF1YBR009C 312 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 DIP2YLR129W 2832 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 BCK2YER167W 2556 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 KIN4YOR233W 2403 nt3.82□□□□□ -1.8
TY1A-LR2P0CX72 DNM1YLL001W 2274 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms