Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 UBE2SP1-201ENST00000450587 669 ntBASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHAC2Q9Y5I4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 RN7SL471P-201ENST00000580476 299 ntBASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 Z99916.2-201ENST00000604037 246 ntBASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHAC2Q9Y5I4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.83■■□□□ 1.56
PCDHAC2Q9Y5I4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHAC2Q9Y5I4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHAC2Q9Y5I4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 AC069544.1-201ENST00000609399 999 ntBASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 FAM197Y4-202ENST00000622692 608 ntBASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHAC2Q9Y5I4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHAC2Q9Y5I4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHAC2Q9Y5I4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 KRT17P3-201ENST00000420566 1262 ntBASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 AC105020.6-201ENST00000621523 1217 ntBASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHAC2Q9Y5I4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms